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The map label for this gene is ycjS [C]

Identifier: 124025528

GI number: 124025528

Start: 755286

End: 756386

Strand: Reverse

Name: ycjS [C]

Synonym: NATL1_08211

Alternate gene names: 124025528

Gene position: 756386-755286 (Counterclockwise)

Preceding gene: 124025529

Following gene: 124025527

Centisome position: 40.56

GC content: 38.96

Gene sequence:

>1101_bases
ATGATCAATACAGATCATCCGATTCGCATAGCAATTGCAGGACTAGGTTTCGGTGAAAGTGTTCATATTCCTGCATCATT
ATCTAATAAGAATATTGAGCTTGTGGGATTGTGGCATCCTCGGCCAGAAAGGCTTAAAGAAGCCTGCAATAAGCACAATC
TTCGTGCCTACGAGACCTGGGAGGATTTAGTAAATGACTCCAAAGTAGATGGAATAATCATAGCTACTCCGCCAGCTCCC
AGATACGAGCTTGCACTAGAGGCAATTAAAGGAGGAAAACATCTTTTACTTGAAAAGCCAACTTGTTTAAATGCTTATGA
GGTGATGGAGCTTCAAAGAAACGCTCTCAAAAGAAATTTAAAAATAGCTGTTGATTACGAATATCGGGCTGTTCCACTAT
TCATGCAAGCAAAGCGAATAATTACCGAGAAGAAACTAGATGAACCATATTTTGTAAAGCTTGATTGGCTAATGAGTAGC
AGGGCTAATCCAGATAGGCCATGGAATTGGTATTCAGATGAAAATTCTGGTGGAGGGGTACTAGGAGCCTTGGGAACCCA
TGCTTTTGACATGATTCATTGGCTAATTGGTCCTACTCATTCTTTGAGCGCAATAAATTCAACTTCAATTAAAGAAAGAG
AGTGTCCACAATCAAAAACCATTAAAAAAGTGACCAGTGAAGATGTAAGTATTTCTCAACTACAAATAAAAAGCATTAAT
AACAATTTAATTCCAGCCCAAGTAAATTTATCTGCCGTAACAAAACAAAGTAGGGGTTTTAGTCTGGAAATCTATGGAAG
CAATGGAACACTTGTTCTTAGCAGCGAGAACCAGAACGATTATGTTCACGGATTTGGGCTTTGGTACTCAAATAAAGGAG
ACGTTCTTAAAAATTTCCAACCTGACTCTGACCTATCTTTTTCAAAAATATGGAAAGATGGTCGAATAGCTCCAGTAGCA
AGAATCCAAAACTGGTGGGCTCAAAGCATTGCAGATGGAACCCCAGTAATTCCAGGCTTAGTCGAGGGATTAGCCAGCCA
AATAGTTTGCGATAAGGTAAAGGAATCAAACTCAATAGGTATGAAGATAGAAATCAATTGA

Upstream 100 bases:

>100_bases
TTTATCCGCAAAATGGGAAGACCCTAATGGGGATAAACTATTAGATGATGTGATTTCAGATAGCTGCGAAAATGTTTAAA
CTCATAAATTATTTAAAAGA

Downstream 100 bases:

>100_bases
AGAAATCCAATTCAACTCAAGTAAAAATAATTTTTAGAATTAATTATTGGATTAAAAAAATAAAAAACTTTTTAGGTGTA
ATAAGCAACAAAAGGGGCCT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MINTDHPIRIAIAGLGFGESVHIPASLSNKNIELVGLWHPRPERLKEACNKHNLRAYETWEDLVNDSKVDGIIIATPPAP
RYELALEAIKGGKHLLLEKPTCLNAYEVMELQRNALKRNLKIAVDYEYRAVPLFMQAKRIITEKKLDEPYFVKLDWLMSS
RANPDRPWNWYSDENSGGGVLGALGTHAFDMIHWLIGPTHSLSAINSTSIKERECPQSKTIKKVTSEDVSISQLQIKSIN
NNLIPAQVNLSAVTKQSRGFSLEIYGSNGTLVLSSENQNDYVHGFGLWYSNKGDVLKNFQPDSDLSFSKIWKDGRIAPVA
RIQNWWAQSIADGTPVIPGLVEGLASQIVCDKVKESNSIGMKIEIN

Sequences:

>Translated_366_residues
MINTDHPIRIAIAGLGFGESVHIPASLSNKNIELVGLWHPRPERLKEACNKHNLRAYETWEDLVNDSKVDGIIIATPPAP
RYELALEAIKGGKHLLLEKPTCLNAYEVMELQRNALKRNLKIAVDYEYRAVPLFMQAKRIITEKKLDEPYFVKLDWLMSS
RANPDRPWNWYSDENSGGGVLGALGTHAFDMIHWLIGPTHSLSAINSTSIKERECPQSKTIKKVTSEDVSISQLQIKSIN
NNLIPAQVNLSAVTKQSRGFSLEIYGSNGTLVLSSENQNDYVHGFGLWYSNKGDVLKNFQPDSDLSFSKIWKDGRIAPVA
RIQNWWAQSIADGTPVIPGLVEGLASQIVCDKVKESNSIGMKIEIN
>Mature_366_residues
MINTDHPIRIAIAGLGFGESVHIPASLSNKNIELVGLWHPRPERLKEACNKHNLRAYETWEDLVNDSKVDGIIIATPPAP
RYELALEAIKGGKHLLLEKPTCLNAYEVMELQRNALKRNLKIAVDYEYRAVPLFMQAKRIITEKKLDEPYFVKLDWLMSS
RANPDRPWNWYSDENSGGGVLGALGTHAFDMIHWLIGPTHSLSAINSTSIKERECPQSKTIKKVTSEDVSISQLQIKSIN
NNLIPAQVNLSAVTKQSRGFSLEIYGSNGTLVLSSENQNDYVHGFGLWYSNKGDVLKNFQPDSDLSFSKIWKDGRIAPVA
RIQNWWAQSIADGTPVIPGLVEGLASQIVCDKVKESNSIGMKIEIN

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=221, Percent_Identity=24.4343891402715, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6323975, Length=329, Percent_Identity=23.4042553191489, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19920536, Length=273, Percent_Identity=24.5421245421245, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40899; Mature: 40899

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTDHPIRIAIAGLGFGESVHIPASLSNKNIELVGLWHPRPERLKEACNKHNLRAYETW
CCCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEHHH
EDLVNDSKVDGIIIATPPAPRYELALEAIKGGKHLLLEKPTCLNAYEVMELQRNALKRNL
HHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
KIAVDYEYRAVPLFMQAKRIITEKKLDEPYFVKLDWLMSSRANPDRPWNWYSDENSGGGV
EEEEECCCEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
LGALGTHAFDMIHWLIGPTHSLSAINSTSIKERECPQSKTIKKVTSEDVSISQLQIKSIN
EEHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHCCCCHHHHHHHHCCCCEEEEEEEEECC
NNLIPAQVNLSAVTKQSRGFSLEIYGSNGTLVLSSENQNDYVHGFGLWYSNKGDVLKNFQ
CCCCEEEECHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCHHHCCC
PDSDLSFSKIWKDGRIAPVARIQNWWAQSIADGTPVIPGLVEGLASQIVCDKVKESNSIG
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
MKIEIN
EEEEEC
>Mature Secondary Structure
MINTDHPIRIAIAGLGFGESVHIPASLSNKNIELVGLWHPRPERLKEACNKHNLRAYETW
CCCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEHHH
EDLVNDSKVDGIIIATPPAPRYELALEAIKGGKHLLLEKPTCLNAYEVMELQRNALKRNL
HHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
KIAVDYEYRAVPLFMQAKRIITEKKLDEPYFVKLDWLMSSRANPDRPWNWYSDENSGGGV
EEEEECCCEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
LGALGTHAFDMIHWLIGPTHSLSAINSTSIKERECPQSKTIKKVTSEDVSISQLQIKSIN
EEHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHCCCCHHHHHHHHCCCCEEEEEEEEECC
NNLIPAQVNLSAVTKQSRGFSLEIYGSNGTLVLSSENQNDYVHGFGLWYSNKGDVLKNFQ
CCCCEEEECHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCHHHCCC
PDSDLSFSKIWKDGRIAPVARIQNWWAQSIADGTPVIPGLVEGLASQIVCDKVKESNSIG
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
MKIEIN
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]