| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025524
Identifier: 124025524
GI number: 124025524
Start: 752798
End: 752983
Strand: Direct
Name: 124025524
Synonym: NATL1_08171
Alternate gene names: NA
Gene position: 752798-752983 (Clockwise)
Preceding gene: 124025523
Following gene: 124025525
Centisome position: 40.37
GC content: 37.1
Gene sequence:
>186_bases GTGAGTCAAGCAGTTTCCACTACCAAGAGAAATGATGTTCAGAGTGTTGCCAATGCTTTGAAACTGAAGACCTGCAATAA ATGTGGCGGTAATGGTTATATGAAATCTAGCCCAAATTGTTATCACACTTGTTTGACATGCCTAGGAAAAGGATTAATAA GTGAACAATGTGAAAGTATCAATTAG
Upstream 100 bases:
>100_bases AAAAATAGGTTGTATTTCTATTTTTATCCGCGATTCTTTGTGAGTTAGGAGATAATTCTCTTGAAGCAATTTTCTAATAG TTTCTAACCGGACATTTTTC
Downstream 100 bases:
>100_bases AAATTTATCAAATATTATCTACAATAACTTTGTAACCTTCTTTCTTGGGTTAACTAAGTGAAGGAAGTAGGAAATCCCAT TGATTTTTAAAAGTGTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSQAVSTTKRNDVQSVANALKLKTCNKCGGNGYMKSSPNCYHTCLTCLGKGLISEQCESIN
Sequences:
>Translated_61_residues MSQAVSTTKRNDVQSVANALKLKTCNKCGGNGYMKSSPNCYHTCLTCLGKGLISEQCESIN >Mature_60_residues SQAVSTTKRNDVQSVANALKLKTCNKCGGNGYMKSSPNCYHTCLTCLGKGLISEQCESIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6531; Mature: 6399
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 13.1 %Cys+Met (Translated Protein) 10.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 11.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAVSTTKRNDVQSVANALKLKTCNKCGGNGYMKSSPNCYHTCLTCLGKGLISEQCESI CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC N C >Mature Secondary Structure SQAVSTTKRNDVQSVANALKLKTCNKCGGNGYMKSSPNCYHTCLTCLGKGLISEQCESI CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA