| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025484
Identifier: 124025484
GI number: 124025484
Start: 710036
End: 711589
Strand: Reverse
Name: 124025484
Synonym: NATL1_07771
Alternate gene names: NA
Gene position: 711589-710036 (Counterclockwise)
Preceding gene: 124025485
Following gene: 124025482
Centisome position: 38.16
GC content: 33.14
Gene sequence:
>1554_bases ATGAAAATCCATAACTCTAGGAAAATAATATTTTATGTATTGATAATTTTCATTAGCTTGATAATTATAGGTCTGGTCGG AGCAATAATTAGATTGATAAATATACCTGCCATATTAATTACAGTATTAATAATATGTGGTTTAAGTTATACAAAAAAAA TAGACTGGTTACAAAATAGTCTAAGATCAATATTTAAAATAAAGGATGAGAAGAAATCATTAGATTTATCGCTAATTAGC AAAAAAGAAGCCGCAGATAAATCATTAAAAAGTATTGATCATTTAATCACATTAATCAATGACAAAGTCAAGGCCAAGGC CTTAAAGGATGAAAAGGATAGGGTTTCATTAGAGTTAGATAGAGGAGATATTATTTTAGTAGTTTTTGGAATTGGCTCAA GCGGTAAAACTTCATTAATAAGAGCCCTATTAAAAAAAATAGTAGGTAAAGTTAGTCCTGAAATGGGATCAACGAGAGGG AAAGAAACCTTCCGACTGAAACTTAAAGGACTTACAAGAGGAATAAGAATAATTGACACTCCTGGCATACTGGAATCCGG GAGAGGGGGTAGAGAGAGGGAAAAAAGTGCGTTAATGGAAGCACGTAAATCTGATTTAATGTTAGTAGTAATTGAAGGTG ATTTACGTTCTGAAGAAACAAGAACAATTAGGAGTTTGTCAAAATTAGGAAAAAGACTTTTACTTGTGCTAAATAAAATA GATTTAAGAGGAGAAAGTGAAGAAAAAAGATTAATTGAGATACTAAATTCTAGATGTAATGATTTTATTGGTCCAAATGA CATTATTTGTACATCAGCATCACCTCAGACAATTGCAGTCACTGGCAGAAAGCCTTATCAACCAGCCCCTGAAATCAATA GTTTAATTAGAAGATTAGCAAATATACTTCATGAAGAAGGTGAAGAATTAATTGCGGATAATATTTTACTTCAATGCAGC AATATTGGAAAAGAAGGGAAAAATTTATTAATCAAACAAAGAACTCAATCTGCTAAAAAATGTATAGATAAGTATGGGTG GCTCAGCAGCGGTGCATTAATACTAACTCCAGTTCCTGTCTTAGACATGATCGCTGCAGCGGCTGTAAATGCACAAATGG TAATAGAAATAGCTAAAATACATGGAGTTAAACTTACAAATGAAAGGGCAAAGAATTTAGCGCTTTCGGTAGGAAAAATA CTTGCAACTATGGGTATAGTTAAAGGTGGAGTTTCTCTAATAAGTTCAACATTAAGTTTATCACTACCAACATTAGTTAT TAGCAAAGTAATTCAAGGTATTAGTGTATCTTGGCTTACTAGGATTGCTGGAGCAAGTTTCATTACTTATTTCCAACAAG ATCAAGACTGGGGAGATGGAGGAATACAAGAAGTTGTTGAATATCACTACAACTTAAACAAAAGGGAGGAATATTTTAAA AGTTTTATTCGGAGAGCTTATGAGAGAGTTATTGATCCGCTAGTTGAAAAGAATTTGAAAAAGCTACCACCGAGATCAAG GCCTCCGAAGGAGGGGGACTCATCGGTCCTCTAA
Upstream 100 bases:
>100_bases AGATATAGCAATAAACATTGCTATATTTTGTTTTATAATTGATATAATTAAAACTCAAGACAAGTCAAAATTAAAGTATT AAATGAATGGTAATTAACAA
Downstream 100 bases:
>100_bases AATCTAAAGCAAAAACTAATGCTAAATAAATTAGGCCAACGAAAATTGATATTAAAGCTGTTATTAAAGCCAATATATTT TTTTTATTAAAAAAATCCTT
Product: GTPase SAR1 and related small G proteins
Products: NA
Alternate protein names: Membrane Associated GTPase; GTPase SAR1 And Related Small G Proteins; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MKIHNSRKIIFYVLIIFISLIIIGLVGAIIRLINIPAILITVLIICGLSYTKKIDWLQNSLRSIFKIKDEKKSLDLSLIS KKEAADKSLKSIDHLITLINDKVKAKALKDEKDRVSLELDRGDIILVVFGIGSSGKTSLIRALLKKIVGKVSPEMGSTRG KETFRLKLKGLTRGIRIIDTPGILESGRGGREREKSALMEARKSDLMLVVIEGDLRSEETRTIRSLSKLGKRLLLVLNKI DLRGESEEKRLIEILNSRCNDFIGPNDIICTSASPQTIAVTGRKPYQPAPEINSLIRRLANILHEEGEELIADNILLQCS NIGKEGKNLLIKQRTQSAKKCIDKYGWLSSGALILTPVPVLDMIAAAAVNAQMVIEIAKIHGVKLTNERAKNLALSVGKI LATMGIVKGGVSLISSTLSLSLPTLVISKVIQGISVSWLTRIAGASFITYFQQDQDWGDGGIQEVVEYHYNLNKREEYFK SFIRRAYERVIDPLVEKNLKKLPPRSRPPKEGDSSVL
Sequences:
>Translated_517_residues MKIHNSRKIIFYVLIIFISLIIIGLVGAIIRLINIPAILITVLIICGLSYTKKIDWLQNSLRSIFKIKDEKKSLDLSLIS KKEAADKSLKSIDHLITLINDKVKAKALKDEKDRVSLELDRGDIILVVFGIGSSGKTSLIRALLKKIVGKVSPEMGSTRG KETFRLKLKGLTRGIRIIDTPGILESGRGGREREKSALMEARKSDLMLVVIEGDLRSEETRTIRSLSKLGKRLLLVLNKI DLRGESEEKRLIEILNSRCNDFIGPNDIICTSASPQTIAVTGRKPYQPAPEINSLIRRLANILHEEGEELIADNILLQCS NIGKEGKNLLIKQRTQSAKKCIDKYGWLSSGALILTPVPVLDMIAAAAVNAQMVIEIAKIHGVKLTNERAKNLALSVGKI LATMGIVKGGVSLISSTLSLSLPTLVISKVIQGISVSWLTRIAGASFITYFQQDQDWGDGGIQEVVEYHYNLNKREEYFK SFIRRAYERVIDPLVEKNLKKLPPRSRPPKEGDSSVL >Mature_517_residues MKIHNSRKIIFYVLIIFISLIIIGLVGAIIRLINIPAILITVLIICGLSYTKKIDWLQNSLRSIFKIKDEKKSLDLSLIS KKEAADKSLKSIDHLITLINDKVKAKALKDEKDRVSLELDRGDIILVVFGIGSSGKTSLIRALLKKIVGKVSPEMGSTRG KETFRLKLKGLTRGIRIIDTPGILESGRGGREREKSALMEARKSDLMLVVIEGDLRSEETRTIRSLSKLGKRLLLVLNKI DLRGESEEKRLIEILNSRCNDFIGPNDIICTSASPQTIAVTGRKPYQPAPEINSLIRRLANILHEEGEELIADNILLQCS NIGKEGKNLLIKQRTQSAKKCIDKYGWLSSGALILTPVPVLDMIAAAAVNAQMVIEIAKIHGVKLTNERAKNLALSVGKI LATMGIVKGGVSLISSTLSLSLPTLVISKVIQGISVSWLTRIAGASFITYFQQDQDWGDGGIQEVVEYHYNLNKREEYFK SFIRRAYERVIDPLVEKNLKKLPPRSRPPKEGDSSVL
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57367; Mature: 57367
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHNSRKIIFYVLIIFISLIIIGLVGAIIRLINIPAILITVLIICGLSYTKKIDWLQNS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LRSIFKIKDEKKSLDLSLISKKEAADKSLKSIDHLITLINDKVKAKALKDEKDRVSLELD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC RGDIILVVFGIGSSGKTSLIRALLKKIVGKVSPEMGSTRGKETFRLKLKGLTRGIRIIDT CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCEEEEC PGILESGRGGREREKSALMEARKSDLMLVVIEGDLRSEETRTIRSLSKLGKRLLLVLNKI CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH DLRGESEEKRLIEILNSRCNDFIGPNDIICTSASPQTIAVTGRKPYQPAPEINSLIRRLA CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH NILHEEGEELIADNILLQCSNIGKEGKNLLIKQRTQSAKKCIDKYGWLSSGALILTPVPV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHH LDMIAAAAVNAQMVIEIAKIHGVKLTNERAKNLALSVGKILATMGIVKGGVSLISSTLSL HHHHHHHHCCHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPTLVISKVIQGISVSWLTRIAGASFITYFQQDQDWGDGGIQEVVEYHYNLNKREEYFK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH SFIRRAYERVIDPLVEKNLKKLPPRSRPPKEGDSSVL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIHNSRKIIFYVLIIFISLIIIGLVGAIIRLINIPAILITVLIICGLSYTKKIDWLQNS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LRSIFKIKDEKKSLDLSLISKKEAADKSLKSIDHLITLINDKVKAKALKDEKDRVSLELD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC RGDIILVVFGIGSSGKTSLIRALLKKIVGKVSPEMGSTRGKETFRLKLKGLTRGIRIIDT CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCEEEEC PGILESGRGGREREKSALMEARKSDLMLVVIEGDLRSEETRTIRSLSKLGKRLLLVLNKI CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH DLRGESEEKRLIEILNSRCNDFIGPNDIICTSASPQTIAVTGRKPYQPAPEINSLIRRLA CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH NILHEEGEELIADNILLQCSNIGKEGKNLLIKQRTQSAKKCIDKYGWLSSGALILTPVPV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHH LDMIAAAAVNAQMVIEIAKIHGVKLTNERAKNLALSVGKILATMGIVKGGVSLISSTLSL HHHHHHHHCCHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPTLVISKVIQGISVSWLTRIAGASFITYFQQDQDWGDGGIQEVVEYHYNLNKREEYFK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH SFIRRAYERVIDPLVEKNLKKLPPRSRPPKEGDSSVL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA