| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025463
Identifier: 124025463
GI number: 124025463
Start: 692522
End: 693367
Strand: Direct
Name: 124025463
Synonym: NATL1_07561
Alternate gene names: NA
Gene position: 692522-693367 (Clockwise)
Preceding gene: 124025462
Following gene: 124025464
Centisome position: 37.14
GC content: 26.95
Gene sequence:
>846_bases ATGAAGGATATTTTATTTAACTTTACTGAAATACGGATAGAAATATCTTTTAAATCTTTTGATGAACTTCGTAAGAATCT ATCTTTTTACAAGCGAAATAATCTTTATAAAATTAATGTACCCTGTAAAAATACTTTAAAAAAAGATTTTCTTTTAAAGT CGATTGAAATTGCAAAAGATGAGTTTCCCAATATAGATATTATTCCTCACTTTAGTATTCTCCATGAATTTAAAAGAAAC ATGATTAATACTCATGATTCTTTAGTTAACTTTCTGGAGGCTGTTAAATATTATGGATGCAAGCATGTACTTCTAGTTTC TGGTTCTCAAAAAAGAGCGTCAATAGATTCTGTTTCGGCATTATGTTTGCTTAAAGATAATTCTTTGTTTCTTGATCAAG ATATTTCTTTTGGCGTAGCATTTAATCCTTACTTACCTCCGTATTTGTTTGATGAAGAGATTTTAAGATTAGAAAAGAAA CTTCAATCGGGTTTAGTTAGTTCTATCTGGATTCAATTTGGTACCGATTATAAACTTCTCAAAAGTAGGATTGAAATACT CTCAAGGTTGATATCTGCGACTATTAATAAAAATCCTAAAATTTCAAAAATTAGTTTATTTGGTAGTATTTTAATTCCTT CTAAGCAATTTCTAGCTAGATTTAAGTATCGACCATGGAAAGGTGTTTATTGTTCTAATGAATTTTTAGAATCAGAGGAA ATGGCTCATGAAATAATTATAAATCTATTAATGACTTATAAACAAAATGAAATTTGTCCACTTATTGAGACAAATATTAC TACGGATGAACATTTGAAAAAATTATCAAATATCTTTAATTTATAG
Upstream 100 bases:
>100_bases ATGTATATAATTTTAATTAATCTATATATTAAAGTCATTTTAAATCTCTTTATTTACATGATATGATTAACTAAAAGATT CTTTTATTATTATATTTTAA
Downstream 100 bases:
>100_bases ATTAAATATTATGTGCTCTTAAATGTATCTGAAATAGCTTTAAATTTAAAAAAAATTCTACCTAAGTTCTAATTTAGAAC TTAATGAATTTGTTTGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Paired Amphipathic Helix Repeat
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKDILFNFTEIRIEISFKSFDELRKNLSFYKRNNLYKINVPCKNTLKKDFLLKSIEIAKDEFPNIDIIPHFSILHEFKRN MINTHDSLVNFLEAVKYYGCKHVLLVSGSQKRASIDSVSALCLLKDNSLFLDQDISFGVAFNPYLPPYLFDEEILRLEKK LQSGLVSSIWIQFGTDYKLLKSRIEILSRLISATINKNPKISKISLFGSILIPSKQFLARFKYRPWKGVYCSNEFLESEE MAHEIIINLLMTYKQNEICPLIETNITTDEHLKKLSNIFNL
Sequences:
>Translated_281_residues MKDILFNFTEIRIEISFKSFDELRKNLSFYKRNNLYKINVPCKNTLKKDFLLKSIEIAKDEFPNIDIIPHFSILHEFKRN MINTHDSLVNFLEAVKYYGCKHVLLVSGSQKRASIDSVSALCLLKDNSLFLDQDISFGVAFNPYLPPYLFDEEILRLEKK LQSGLVSSIWIQFGTDYKLLKSRIEILSRLISATINKNPKISKISLFGSILIPSKQFLARFKYRPWKGVYCSNEFLESEE MAHEIIINLLMTYKQNEICPLIETNITTDEHLKKLSNIFNL >Mature_281_residues MKDILFNFTEIRIEISFKSFDELRKNLSFYKRNNLYKINVPCKNTLKKDFLLKSIEIAKDEFPNIDIIPHFSILHEFKRN MINTHDSLVNFLEAVKYYGCKHVLLVSGSQKRASIDSVSALCLLKDNSLFLDQDISFGVAFNPYLPPYLFDEEILRLEKK LQSGLVSSIWIQFGTDYKLLKSRIEILSRLISATINKNPKISKISLFGSILIPSKQFLARFKYRPWKGVYCSNEFLESEE MAHEIIINLLMTYKQNEICPLIETNITTDEHLKKLSNIFNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32794; Mature: 32794
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDILFNFTEIRIEISFKSFDELRKNLSFYKRNNLYKINVPCKNTLKKDFLLKSIEIAKD CCCHHEEEEEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH EFPNIDIIPHFSILHEFKRNMINTHDSLVNFLEAVKYYGCKHVLLVSGSQKRASIDSVSA CCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHE LCLLKDNSLFLDQDISFGVAFNPYLPPYLFDEEILRLEKKLQSGLVSSIWIQFGTDYKLL EEEEECCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHH KSRIEILSRLISATINKNPKISKISLFGSILIPSKQFLARFKYRPWKGVYCSNEFLESEE HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHH MAHEIIINLLMTYKQNEICPLIETNITTDEHLKKLSNIFNL HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKDILFNFTEIRIEISFKSFDELRKNLSFYKRNNLYKINVPCKNTLKKDFLLKSIEIAKD CCCHHEEEEEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH EFPNIDIIPHFSILHEFKRNMINTHDSLVNFLEAVKYYGCKHVLLVSGSQKRASIDSVSA CCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHE LCLLKDNSLFLDQDISFGVAFNPYLPPYLFDEEILRLEKKLQSGLVSSIWIQFGTDYKLL EEEEECCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHH KSRIEILSRLISATINKNPKISKISLFGSILIPSKQFLARFKYRPWKGVYCSNEFLESEE HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHH MAHEIIINLLMTYKQNEICPLIETNITTDEHLKKLSNIFNL HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA