| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025462
Identifier: 124025462
GI number: 124025462
Start: 691952
End: 692422
Strand: Direct
Name: 124025462
Synonym: NATL1_07551
Alternate gene names: NA
Gene position: 691952-692422 (Clockwise)
Preceding gene: 124025461
Following gene: 124025463
Centisome position: 37.11
GC content: 35.88
Gene sequence:
>471_bases TTGACAAATAAAACACTTTATCTTGCCTCTCCATATGGCTTCTCTGAGCACTGGAGGCTGAAACTTTTACCTGACTTTGT ATCTAAATTGGAGTTTATGGGGGCGAGTGTTTTGGAACCTTTTGATCGTAATAGTCAAATTGATATTTCTGCGCCTGGTT GGGCTAATAAAGTTGCTAATTCAAACTTAAACGATTTGAGGCAAGCTGATGGCTTATTCGCAATAGTTAATGGATCACCA CCTGATGAGGGAGTAATGGTTGAGATTGGGGTCGCTATTGCTTTAGGAAAAACTACATTTTTATTTAGAGATGATTTTCG TAAATGTTCTGATTCTAATGAATACCCCCTTAACTTAATGGTCTTTCTTGGGTTGCCTTCTGATTCATGGAATGATTACT ATTATTCTTCTTTGGATGACCTTGATAGTAAAAAGAAAGCTATTTATAAATGGTTGAGAAATGATTTGTAA
Upstream 100 bases:
>100_bases AAGATTTATCACTTCTACTGGTAAAAGATGCAAATGAGCGTTTTTCTGAGAAAAATCAAGGAAAACTTCCACTAAACAAA TCTAAATTAGATTAATAAAA
Downstream 100 bases:
>100_bases TGTATATAATTTTAATTAATCTATATATTAAAGTCATTTTAAATCTCTTTATTTACATGATATGATTAACTAAAAGATTC TTTTATTATTATATTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTNKTLYLASPYGFSEHWRLKLLPDFVSKLEFMGASVLEPFDRNSQIDISAPGWANKVANSNLNDLRQADGLFAIVNGSP PDEGVMVEIGVAIALGKTTFLFRDDFRKCSDSNEYPLNLMVFLGLPSDSWNDYYYSSLDDLDSKKKAIYKWLRNDL
Sequences:
>Translated_156_residues MTNKTLYLASPYGFSEHWRLKLLPDFVSKLEFMGASVLEPFDRNSQIDISAPGWANKVANSNLNDLRQADGLFAIVNGSP PDEGVMVEIGVAIALGKTTFLFRDDFRKCSDSNEYPLNLMVFLGLPSDSWNDYYYSSLDDLDSKKKAIYKWLRNDL >Mature_155_residues TNKTLYLASPYGFSEHWRLKLLPDFVSKLEFMGASVLEPFDRNSQIDISAPGWANKVANSNLNDLRQADGLFAIVNGSPP DEGVMVEIGVAIALGKTTFLFRDDFRKCSDSNEYPLNLMVFLGLPSDSWNDYYYSSLDDLDSKKKAIYKWLRNDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17673; Mature: 17542
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKTLYLASPYGFSEHWRLKLLPDFVSKLEFMGASVLEPFDRNSQIDISAPGWANKVAN CCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHCHHHCCCCCCCCEEEEECCCCHHHHCC SNLNDLRQADGLFAIVNGSPPDEGVMVEIGVAIALGKTTFLFRDDFRKCSDSNEYPLNLM CCHHHHHHCCCEEEEECCCCCCCCEEEEEEEEEEECCEEEEEEHHHHHCCCCCCCCEEEE VFLGLPSDSWNDYYYSSLDDLDSKKKAIYKWLRNDL EEEECCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure TNKTLYLASPYGFSEHWRLKLLPDFVSKLEFMGASVLEPFDRNSQIDISAPGWANKVAN CCCEEEEECCCCCCCCCEEEECHHHHHHHHHHCHHHCCCCCCCCEEEEECCCCHHHHCC SNLNDLRQADGLFAIVNGSPPDEGVMVEIGVAIALGKTTFLFRDDFRKCSDSNEYPLNLM CCHHHHHHCCCEEEEECCCCCCCCEEEEEEEEEEECCEEEEEEHHHHHCCCCCCCCEEEE VFLGLPSDSWNDYYYSSLDDLDSKKKAIYKWLRNDL EEEECCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA