Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025444
Identifier: 124025444
GI number: 124025444
Start: 678757
End: 679311
Strand: Reverse
Name: 124025444
Synonym: NATL1_07371
Alternate gene names: NA
Gene position: 679311-678757 (Counterclockwise)
Preceding gene: 124025445
Following gene: 124025442
Centisome position: 36.43
GC content: 29.55
Gene sequence:
>555_bases GTGAATTTATCTCTTTTTATTGTTGTTTTAGGGGGAAGAAGTTTAAAAAGTAATATAGAAATACATGATGTAAGATGGGT TTTAGGTGAAAAAATAGAGGATACATTCCCTGAGCTTAGGAAACAATGGTTAGGAAAGAAAAGCGGACTCCATATTGATA GTTATAAGTGTATTAAATATATAGATGGCTATCAAATAGTCATTTCTAAATCTAATAAAAATAATTTAAATTCCCCTAAA ATAGAAGACTTAAAACTTTGGTTTGTTAATTTAGGTGGGTACAATCCTAAAAAGATGTATGAAGAACATGAATTCACACT AGTTGTCGCACAAAAAGCTATTGAGGCAAAGAAAAAAGCTAAAATTAATTGGGAAACAACTTTAAAAAATAAACATAATG ATGACTACTCAGGTATAAATTATTTTGAACAGGTGGACGATTTGCATCCTATAAAAATAAAGAATTGGGAAATAAAGCTG ATACCAGACGTTCAAGAAAGAAGCGAAAAAATTATTCCTGACTGGTATGGATATAGGAGAATTGACAAGTTCTAA
Upstream 100 bases:
>100_bases TAAAAGAAATGAATCCAGAGTTGCACATGGACGAACAAATTAGATTAATGGCTTATAAGCCACTGAAAAAAATGCTTGAT ATGAGTAATTGATTTCAAGT
Downstream 100 bases:
>100_bases CTAGTTTTTTAGGGCATAGCCCAAATTTGATTTCAAGGGATTATAAGAATTTTTATTACTCTCAATTTTAAACTTTTTAA GTAATATATTTTCAGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNLSLFIVVLGGRSLKSNIEIHDVRWVLGEKIEDTFPELRKQWLGKKSGLHIDSYKCIKYIDGYQIVISKSNKNNLNSPK IEDLKLWFVNLGGYNPKKMYEEHEFTLVVAQKAIEAKKKAKINWETTLKNKHNDDYSGINYFEQVDDLHPIKIKNWEIKL IPDVQERSEKIIPDWYGYRRIDKF
Sequences:
>Translated_184_residues MNLSLFIVVLGGRSLKSNIEIHDVRWVLGEKIEDTFPELRKQWLGKKSGLHIDSYKCIKYIDGYQIVISKSNKNNLNSPK IEDLKLWFVNLGGYNPKKMYEEHEFTLVVAQKAIEAKKKAKINWETTLKNKHNDDYSGINYFEQVDDLHPIKIKNWEIKL IPDVQERSEKIIPDWYGYRRIDKF >Mature_184_residues MNLSLFIVVLGGRSLKSNIEIHDVRWVLGEKIEDTFPELRKQWLGKKSGLHIDSYKCIKYIDGYQIVISKSNKNNLNSPK IEDLKLWFVNLGGYNPKKMYEEHEFTLVVAQKAIEAKKKAKINWETTLKNKHNDDYSGINYFEQVDDLHPIKIKNWEIKL IPDVQERSEKIIPDWYGYRRIDKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21770; Mature: 21770
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSLFIVVLGGRSLKSNIEIHDVRWVLGEKIEDTFPELRKQWLGKKSGLHIDSYKCIKY CCEEEEEEEECCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCEECCCHHEEE IDGYQIVISKSNKNNLNSPKIEDLKLWFVNLGGYNPKKMYEEHEFTLVVAQKAIEAKKKA CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCEEEEEEHHHHHHHHHC KINWETTLKNKHNDDYSGINYFEQVDDLHPIKIKNWEIKLIPDVQERSEKIIPDWYGYRR CCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEECCEEEEECCCHHHHCCCCCCCCCCCEE IDKF CCCC >Mature Secondary Structure MNLSLFIVVLGGRSLKSNIEIHDVRWVLGEKIEDTFPELRKQWLGKKSGLHIDSYKCIKY CCEEEEEEEECCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCEECCCHHEEE IDGYQIVISKSNKNNLNSPKIEDLKLWFVNLGGYNPKKMYEEHEFTLVVAQKAIEAKKKA CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCEEEEEEHHHHHHHHHC KINWETTLKNKHNDDYSGINYFEQVDDLHPIKIKNWEIKLIPDVQERSEKIIPDWYGYRR CCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEECCEEEEECCCHHHHCCCCCCCCCCCEE IDKF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA