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The map label for this gene is 124025440

Identifier: 124025440

GI number: 124025440

Start: 675560

End: 676123

Strand: Direct

Name: 124025440

Synonym: NATL1_07331

Alternate gene names: NA

Gene position: 675560-676123 (Clockwise)

Preceding gene: 124025439

Following gene: 124025441

Centisome position: 36.23

GC content: 34.75

Gene sequence:

>564_bases
TTGACCATAAACATCTCCTCTGATAAAAACGTTTCTAAAGTTTCTGATTTAGACAATTCCATAAACAAAATCGTTGTATC
CAGGGGCAACCCTTTTGCTAAGTTAATGATTATTGGAGAAGCTCCAGGAGCAAAAGAGGAGGAAATAGGAGAGCCTTTTG
TGGGAAGGTCTGGAAAATTACTTGATAAATTGCTTCAAAATGCTGGAATTGATATTAACCAAGATGTTTATTTTTGCAAC
GTGGTCAAATGTAGACCGCCCAAAAATAGACGCCCAACAAAGATTGAAATACAAGAAAATCTTCCTTGGTTGTATCAACA
AATAAAACTTGTAAACCCTAGTGTAATAGTCCTAGTTGGAGCAACAGCATTAGAAGCTATTTTGAAAATTAAGTCTCCTA
TTAGTATCCTCAGGGGTGAATGGATTGATTGGGAGGGCAAACTTGTAATGCCTGTCTTCCATCCATCTTATTTACTTAGG
AATCCATCTAAAGAGGAAGGAAAACCAATGAGTCTGACTAAATCTGATTTTTTAAAAATTAAGGAAAAAATTGATTTTTT
ATAA

Upstream 100 bases:

>100_bases
CAAAGTTTGGATGTGAGCAATGGATGCTTGACCCAGAAGGCAATCAATTCTTAATTTTGGTGCCCTATTTTTTAAAAGGA
TCAGATAAGGAAGCTTTATT

Downstream 100 bases:

>100_bases
TAGCCCTTAAATATGTCATTCTTATTTATTAAAGAGGCTCAATTGTTAACCCATGATTGCGACCCTAGAAAAAAATATGG
AAGGAAATAATCTCTCTCAG

Product: Uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; DNA Glycosylase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTINISSDKNVSKVSDLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKLLDKLLQNAGIDINQDVYFCN
VVKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVGATALEAILKIKSPISILRGEWIDWEGKLVMPVFHPSYLLR
NPSKEEGKPMSLTKSDFLKIKEKIDFL

Sequences:

>Translated_187_residues
MTINISSDKNVSKVSDLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKLLDKLLQNAGIDINQDVYFCN
VVKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVGATALEAILKIKSPISILRGEWIDWEGKLVMPVFHPSYLLR
NPSKEEGKPMSLTKSDFLKIKEKIDFL
>Mature_186_residues
TINISSDKNVSKVSDLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKLLDKLLQNAGIDINQDVYFCNV
VKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVGATALEAILKIKSPISILRGEWIDWEGKLVMPVFHPSYLLRN
PSKEEGKPMSLTKSDFLKIKEKIDFL

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 21011; Mature: 20880

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINISSDKNVSKVSDLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKL
CEEECCCCCCHHHHHHHHHCHHEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCHHH
LDKLLQNAGIDINQDVYFCNVVKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVG
HHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEEC
ATALEAILKIKSPISILRGEWIDWEGKLVMPVFHPSYLLRNPSKEEGKPMSLTKSDFLKI
HHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCHHHHHHH
KEKIDFL
HHHHCCC
>Mature Secondary Structure 
TINISSDKNVSKVSDLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKL
EEECCCCCCHHHHHHHHHCHHEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCHHH
LDKLLQNAGIDINQDVYFCNVVKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVG
HHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEEC
ATALEAILKIKSPISILRGEWIDWEGKLVMPVFHPSYLLRNPSKEEGKPMSLTKSDFLKI
HHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCHHHHHHH
KEKIDFL
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA