BacMap

Definition	Prochlorococcus marinus str. NATL1A, complete genome.
Accession	NC_008819
Length	1,864,731

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The map label for this gene is phnC [H]

Identifier: 124025436

GI number: 124025436

Start: 672232

End: 672966

Strand: Reverse

Name: phnC [H]

Synonym: NATL1_07291

Alternate gene names: 124025436

Gene position: 672966-672232 (Counterclockwise)

Preceding gene: 124025437

Following gene: 124025435

Centisome position: 36.09

GC content: 31.16

Gene sequence:

>735_bases
GTGACTAAGTTACTAGAATTAAAGAATATAAACCATAGGAGTAAAGAAAGCATTAGAGTAAAAGATATTAATTTAACAAT
AAATCAAGGTGAGAAGATAGCGCTTATCGGCAAAAGTGGCTCTGGCAAAAGTACATTAATCTCGATCGCGAATGGATCAC
TAATCCCGAACGAAGGAGATGTAATATGGAAAGGTTTTCACATTAACAATCTCTCAAATATTGAGTACTCAAAAATAGGA
ACTATATGGCAGAATTTATCTTTGATAGAAGAGCTAAATGTCGCTCAGAATATAAACTGCGGTGCATTAGGTAAACACAA
TTTCATATGGGCTTTAAAAAATCTCCTAGGAGTCATAGATAAAGGTTTATGCCAAGACTGCCTAGCAGCAGTCTCTCTCC
CAAAAAAAACTATTTATTCCTATGTAAATAAACTTTCTGGTGGTCAAAAAAAAAGAATAGCAATTGCACGTCTTTTAAGA
CAAGAACCAGAGATCTTGCTTGGAGACGAACCTTTCTCAAATTTAGACCCTCTATTATCAAAAAATATCTTAAATTTATT
TATTAACCAAAAAAATTATCTTAGAATTAAAATTCCTGAGACCATACTTATAAGTCTTCACCAAATTCATTTAATAAATA
ATTTCAATAGAGTTATTGGGTTAAAAGATGGAGAGATTGTAATAGATAGAGAAATTCATAATATTAATCAATCAGAGCTT
GATTGGCTATTTTAA

Upstream 100 bases:

>100_bases
AACAAATTCTCGAATTATTTAGCGCAAAGAAGTTTATAATATCAAAAAATGAGAATTATAATCAAATAGAAAAGGTAGGC
AGAAAAATTGGAAAGATTAA

Downstream 100 bases:

>100_bases
TTCATAATGAAATTAATAAAACCAGTATCAACTTTATTAACATTAATTCCATCAATAGCCTATATTCCAATTCTAATAGA
AATCATCAAAGGATTTCATA

Product: putative phosphonate ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTKLLELKNINHRSKESIRVKDINLTINQGEKIALIGKSGSGKSTLISIANGSLIPNEGDVIWKGFHINNLSNIEYSKIG
TIWQNLSLIEELNVAQNINCGALGKHNFIWALKNLLGVIDKGLCQDCLAAVSLPKKTIYSYVNKLSGGQKKRIAIARLLR
QEPEILLGDEPFSNLDPLLSKNILNLFINQKNYLRIKIPETILISLHQIHLINNFNRVIGLKDGEIVIDREIHNINQSEL
DWLF

Sequences:

>Translated_244_residues
MTKLLELKNINHRSKESIRVKDINLTINQGEKIALIGKSGSGKSTLISIANGSLIPNEGDVIWKGFHINNLSNIEYSKIG
TIWQNLSLIEELNVAQNINCGALGKHNFIWALKNLLGVIDKGLCQDCLAAVSLPKKTIYSYVNKLSGGQKKRIAIARLLR
QEPEILLGDEPFSNLDPLLSKNILNLFINQKNYLRIKIPETILISLHQIHLINNFNRVIGLKDGEIVIDREIHNINQSEL
DWLF
>Mature_243_residues
TKLLELKNINHRSKESIRVKDINLTINQGEKIALIGKSGSGKSTLISIANGSLIPNEGDVIWKGFHINNLSNIEYSKIGT
IWQNLSLIEELNVAQNINCGALGKHNFIWALKNLLGVIDKGLCQDCLAAVSLPKKTIYSYVNKLSGGQKKRIAIARLLRQ
EPEILLGDEPFSNLDPLLSKNILNLFINQKNYLRIKIPETILISLHQIHLINNFNRVIGLKDGEIVIDREIHNINQSELD
WLF

Specific function: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system [H]

COG id: COG3638

COG function: function code P; ABC-type phosphate/phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI171184400, Length=233, Percent_Identity=32.1888412017167, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI42741659, Length=231, Percent_Identity=29.8701298701299, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI9961250, Length=231, Percent_Identity=29.004329004329, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI4505771, Length=231, Percent_Identity=29.004329004329, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI9961252, Length=231, Percent_Identity=29.004329004329, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI157502201, Length=218, Percent_Identity=28.4403669724771, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI157502203, Length=218, Percent_Identity=28.4403669724771, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI148612844, Length=212, Percent_Identity=29.2452830188679, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI255708477, Length=212, Percent_Identity=29.2452830188679, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI9955963, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI21536378, Length=216, Percent_Identity=28.2407407407407, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI21536376, Length=201, Percent_Identity=25.3731343283582, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI42490749, Length=239, Percent_Identity=25.9414225941423, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1790544, Length=240, Percent_Identity=30.8333333333333, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789672, Length=232, Percent_Identity=33.6206896551724, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI87081709, Length=217, Percent_Identity=29.0322580645161, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1789032, Length=217, Percent_Identity=30.8755760368664, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1787029, Length=187, Percent_Identity=32.620320855615, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786398, Length=239, Percent_Identity=31.3807531380753, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787105, Length=238, Percent_Identity=31.9327731092437, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87081834, Length=236, Percent_Identity=29.6610169491525, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=30.4721030042918, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1788506, Length=217, Percent_Identity=34.5622119815668, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789873, Length=219, Percent_Identity=31.5068493150685, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786253, Length=206, Percent_Identity=31.5533980582524, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI87081791, Length=180, Percent_Identity=31.1111111111111, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1788450, Length=194, Percent_Identity=32.4742268041237, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788897, Length=175, Percent_Identity=34.8571428571429, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786345, Length=239, Percent_Identity=27.6150627615063, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1790467, Length=175, Percent_Identity=34.2857142857143, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786703, Length=209, Percent_Identity=28.7081339712919, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1789891, Length=210, Percent_Identity=27.1428571428571, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787089, Length=220, Percent_Identity=30, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789991, Length=184, Percent_Identity=34.2391304347826, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786872, Length=201, Percent_Identity=29.3532338308458, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788053, Length=199, Percent_Identity=30.6532663316583, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87081782, Length=181, Percent_Identity=28.7292817679558, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787712, Length=184, Percent_Identity=29.8913043478261, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082267, Length=215, Percent_Identity=28.8372093023256, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786563, Length=170, Percent_Identity=30, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788540, Length=228, Percent_Identity=28.0701754385965, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787164, Length=251, Percent_Identity=26.6932270916335, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786698, Length=225, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787143, Length=246, Percent_Identity=26.4227642276423, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1790190, Length=246, Percent_Identity=26.0162601626016, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789864, Length=245, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787112, Length=238, Percent_Identity=28.1512605042017, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI48994997, Length=226, Percent_Identity=23.0088495575221, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790162, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI48995001, Length=223, Percent_Identity=24.6636771300448, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788644, Length=196, Percent_Identity=30.1020408163265, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790525, Length=230, Percent_Identity=30, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789586, Length=215, Percent_Identity=26.046511627907, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788210, Length=188, Percent_Identity=30.3191489361702, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787041, Length=156, Percent_Identity=29.4871794871795, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786653, Length=231, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=211, Percent_Identity=32.2274881516588, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI193202349, Length=242, Percent_Identity=30.5785123966942, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=211, Percent_Identity=32.2274881516588, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=211, Percent_Identity=32.2274881516588, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71992290, Length=242, Percent_Identity=28.5123966942149, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI212646699, Length=213, Percent_Identity=34.2723004694836, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=26.9406392694064, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17533971, Length=215, Percent_Identity=27.906976744186, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=231, Percent_Identity=26.8398268398268, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17541710, Length=219, Percent_Identity=30.1369863013699, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=28.5087719298246, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193208177, Length=208, Percent_Identity=27.4038461538462, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=229, Percent_Identity=27.9475982532751, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=229, Percent_Identity=28.82096069869, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=218, Percent_Identity=29.3577981651376, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569143, Length=233, Percent_Identity=26.6094420600858, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=239, Percent_Identity=28.8702928870293, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=228, Percent_Identity=27.1929824561404, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569081, Length=215, Percent_Identity=29.7674418604651, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24659289, Length=225, Percent_Identity=30.2222222222222, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI281363262, Length=219, Percent_Identity=29.6803652968037, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24653245, Length=219, Percent_Identity=29.6803652968037, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI85726357, Length=212, Percent_Identity=29.7169811320755, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17136662, Length=230, Percent_Identity=30, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24582014, Length=230, Percent_Identity=24.3478260869565, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24582012, Length=230, Percent_Identity=24.3478260869565, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24666092, Length=213, Percent_Identity=28.169014084507, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=25.7777777777778, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI85724864, Length=239, Percent_Identity=30.1255230125523, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580555, Length=239, Percent_Identity=30.1255230125523, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI85816269, Length=239, Percent_Identity=29.7071129707113, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580553, Length=239, Percent_Identity=29.7071129707113, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281362751, Length=212, Percent_Identity=25.4716981132075, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI85725262, Length=193, Percent_Identity=27.979274611399, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24650853, Length=194, Percent_Identity=27.319587628866, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650855, Length=194, Percent_Identity=27.319587628866, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357907, Length=233, Percent_Identity=26.6094420600858, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR012693
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.28 [H]

Molecular weight: Translated: 27460; Mature: 27329

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLLELKNINHRSKESIRVKDINLTINQGEKIALIGKSGSGKSTLISIANGSLIPNEGD
CCCEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
VIWKGFHINNLSNIEYSKIGTIWQNLSLIEELNVAQNINCGALGKHNFIWALKNLLGVID
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
KGLCQDCLAAVSLPKKTIYSYVNKLSGGQKKRIAIARLLRQEPEILLGDEPFSNLDPLLS
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH
KNILNLFINQKNYLRIKIPETILISLHQIHLINNFNRVIGLKDGEIVIDREIHNINQSEL
HHHHHHEECCCCEEEEECCHHHHHHHHHHEEECCCCCEEECCCCCEEEECHHHCCCHHHH
DWLF
CCCC
>Mature Secondary Structure 
TKLLELKNINHRSKESIRVKDINLTINQGEKIALIGKSGSGKSTLISIANGSLIPNEGD
CCEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
VIWKGFHINNLSNIEYSKIGTIWQNLSLIEELNVAQNINCGALGKHNFIWALKNLLGVID
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
KGLCQDCLAAVSLPKKTIYSYVNKLSGGQKKRIAIARLLRQEPEILLGDEPFSNLDPLLS
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH
KNILNLFINQKNYLRIKIPETILISLHQIHLINNFNRVIGLKDGEIVIDREIHNINQSEL
HHHHHHEECCCCEEEEECCHHHHHHHHHHEEECCCCCEEECCCCCEEEECHHHCCCHHHH
DWLF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA