| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025410
Identifier: 124025410
GI number: 124025410
Start: 643452
End: 644396
Strand: Reverse
Name: 124025410
Synonym: NATL1_07011
Alternate gene names: NA
Gene position: 644396-643452 (Counterclockwise)
Preceding gene: 124025411
Following gene: 124025408
Centisome position: 34.56
GC content: 32.28
Gene sequence:
>945_bases ATGGAGATATCTAAAAAAAAATTCCCAAAAATCAAGCGAGACTGTCTTGATACTTTGCAAATAAATATAGGTTATAAATG TAATCAAGCCTGCAGTCATTGTCACGTTGATTCTAGTCCAAGTAGAACAGAAATGATGAGCGATGATATTATAAAACTCA TACCTAAAGTTATCAAAGCTAACAAAATTAAGCTTCTAGATATTACCGGAGGAGCCCCCGAGCTTCATCCTAAATTCAAA CAATTAGTAATAGAAGTACGTAGTCTTAATGTTGAAGTAATGGACAGATGTAATTTAACAATCCTTAAAGAGCCGGGTTA CGAAAGTTTAGCAGGTTTTTTAGCATCAAATAAAGTACAAATAACTGCATCACTTCCTTGCTATCTAGAGGGCAATGTAG ACAAACAACGAGGAAAAGGTGTTTTTGAAAAAAGTATATTAGCTCTTAAACAGCTTAACAATTTAGGTTACGGCATAAAA GATAAAGGTCTGCTTTTGAATCTAGTCTATAATCCAAGTACTCCACAACTTCCACCATCTCAAAAAGAGCTAGAAGATAC TTATAGACGCGAACTAAAAGAAAGGTATGGTATTTTTTTCTCAAATTTATATGTTTTAGCGAATATGCCAATTAATAGAT ATGAGAACTATTTAAAGATAATTGGGAAACTAGAAGAATATAATAAATTACTCAAAGATAATCATAATCCAGGAAATATT AATTCAGTGATGTGTAGATCAACTCTTAGTGTTGATTGGAAAGGTTATTTATATGATTGTGATTTCAACCAACAACTTGG GATGAAAAGAAATGGTAACGTGAAGCATTTGAATGATCTATTGATTCCACTTGTCTCTTTAAAGAATAATCCTATTTCAA TAGGTAATCATTGTTTTGGATGTACTGCTGGAGCGGGTTCAAGTTGTGGTGGAGAATTAACTTAA
Upstream 100 bases:
>100_bases CTAGTAACTTTTAGCTTATTAGTAAAAATTTTTTAAAATTCGCACTTAAATAAATATTTTAACTATAATGACATTTGATG CTTTTCATATATAGATCTTT
Downstream 100 bases:
>100_bases AAAAAAGGTTTATTTGTTAGAACACTTGGGACATAACGCTCTTACGTTAACGATGACTCCAATAATTTAAATCCAAAGTT TTTAGCTGCTGCTTTACCAG
Product: Fe-S oxidoreductases
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MEISKKKFPKIKRDCLDTLQINIGYKCNQACSHCHVDSSPSRTEMMSDDIIKLIPKVIKANKIKLLDITGGAPELHPKFK QLVIEVRSLNVEVMDRCNLTILKEPGYESLAGFLASNKVQITASLPCYLEGNVDKQRGKGVFEKSILALKQLNNLGYGIK DKGLLLNLVYNPSTPQLPPSQKELEDTYRRELKERYGIFFSNLYVLANMPINRYENYLKIIGKLEEYNKLLKDNHNPGNI NSVMCRSTLSVDWKGYLYDCDFNQQLGMKRNGNVKHLNDLLIPLVSLKNNPISIGNHCFGCTAGAGSSCGGELT
Sequences:
>Translated_314_residues MEISKKKFPKIKRDCLDTLQINIGYKCNQACSHCHVDSSPSRTEMMSDDIIKLIPKVIKANKIKLLDITGGAPELHPKFK QLVIEVRSLNVEVMDRCNLTILKEPGYESLAGFLASNKVQITASLPCYLEGNVDKQRGKGVFEKSILALKQLNNLGYGIK DKGLLLNLVYNPSTPQLPPSQKELEDTYRRELKERYGIFFSNLYVLANMPINRYENYLKIIGKLEEYNKLLKDNHNPGNI NSVMCRSTLSVDWKGYLYDCDFNQQLGMKRNGNVKHLNDLLIPLVSLKNNPISIGNHCFGCTAGAGSSCGGELT >Mature_314_residues MEISKKKFPKIKRDCLDTLQINIGYKCNQACSHCHVDSSPSRTEMMSDDIIKLIPKVIKANKIKLLDITGGAPELHPKFK QLVIEVRSLNVEVMDRCNLTILKEPGYESLAGFLASNKVQITASLPCYLEGNVDKQRGKGVFEKSILALKQLNNLGYGIK DKGLLLNLVYNPSTPQLPPSQKELEDTYRRELKERYGIFFSNLYVLANMPINRYENYLKIIGKLEEYNKLLKDNHNPGNI NSVMCRSTLSVDWKGYLYDCDFNQQLGMKRNGNVKHLNDLLIPLVSLKNNPISIGNHCFGCTAGAGSSCGGELT
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35289; Mature: 35289
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISKKKFPKIKRDCLDTLQINIGYKCNQACSHCHVDSSPSRTEMMSDDIIKLIPKVIKA CCCCHHHCHHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC NKIKLLDITGGAPELHPKFKQLVIEVRSLNVEVMDRCNLTILKEPGYESLAGFLASNKVQ CCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHCCEEE ITASLPCYLEGNVDKQRGKGVFEKSILALKQLNNLGYGIKDKGLLLNLVYNPSTPQLPPS EEEECCEEEECCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC QKELEDTYRRELKERYGIFFSNLYVLANMPINRYENYLKIIGKLEEYNKLLKDNHNPGNI HHHHHHHHHHHHHHHHCHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NSVMCRSTLSVDWKGYLYDCDFNQQLGMKRNGNVKHLNDLLIPLVSLKNNPISIGNHCFG HHHHHHHHEEECCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEE CTAGAGSSCGGELT CCCCCCCCCCCCCC >Mature Secondary Structure MEISKKKFPKIKRDCLDTLQINIGYKCNQACSHCHVDSSPSRTEMMSDDIIKLIPKVIKA CCCCHHHCHHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC NKIKLLDITGGAPELHPKFKQLVIEVRSLNVEVMDRCNLTILKEPGYESLAGFLASNKVQ CCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHCCEEE ITASLPCYLEGNVDKQRGKGVFEKSILALKQLNNLGYGIKDKGLLLNLVYNPSTPQLPPS EEEECCEEEECCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC QKELEDTYRRELKERYGIFFSNLYVLANMPINRYENYLKIIGKLEEYNKLLKDNHNPGNI HHHHHHHHHHHHHHHHCHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NSVMCRSTLSVDWKGYLYDCDFNQQLGMKRNGNVKHLNDLLIPLVSLKNNPISIGNHCFG HHHHHHHHEEECCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEE CTAGAGSSCGGELT CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA