Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is yfbT [H]
Identifier: 124025386
GI number: 124025386
Start: 623641
End: 624321
Strand: Reverse
Name: yfbT [H]
Synonym: NATL1_06771
Alternate gene names: 124025386
Gene position: 624321-623641 (Counterclockwise)
Preceding gene: 124025388
Following gene: 124025380
Centisome position: 33.48
GC content: 36.56
Gene sequence:
>681_bases ATGAAGAAAAATTGGAATTTTCCTAAAGCAATTTTATTTGATCTTGATGGAGTTCTCATTGATTCAGAACCCTTACATGG ACAAGCATGGAAAGAAACCGCCGCACTTTTTGATCTAAATTTAACCCTTGACCAACTAAAACTCTTGAGAGGAAAAAGAA GAATTGATTGTGCCAATGAACTAGTTAAATTGATTCCAAAGACAGTTGAGGCGAAAGACTTACTAGACCGTCATAGACCC ATTTCAAGACAACTCATCCTTAGGGCCCAAGCAATGCAAGGTGGAGAGAGCTTAGTAGAAAGGTGTCATAAGAACAATAT CCCAATGGCTTTAGTAACTAGTAGCAGCGCGGAATCATTCCAAATAAAAACGACTCAACACAAATGGATGAATCTATTTT CTGTGATAGTTCTTGGCGATGAAAAATTACTAGCGAAGGGGAAACCAGCTCCAGATCCATATCTACTAGCAGCTAAAAAA TTAAATATTGCTCCTCAAGAATGCTGGGCTGTTGAAGATTCAATTGCTGGAGCATCTTCAGCCTTAGAGGCTGGATGTTG TGTTTTATTTTTAAAAGCACAAAGTGAAGAACTTCCGAAAAAAGAAGATTTGGATCAACACATTAATTTAAGACAAATCA GTCATCTAAAAGAAATTGATCAAATATTGAATGAGTACTAA
Upstream 100 bases:
>100_bases GAATTCATGAAAGATAAAAACAACTTTTCATTTATTTCATTCAAGCTATTTCTGACCAAAAGGCTTGAATAGTGAAACTC TTATTTAAAACAAATTCATA
Downstream 100 bases:
>100_bases GTTAATAAAGTCTGCTAATAACAAATTCAGGTAATTCTAGTAAAGCTGTTTTTGATGGTGAATCTGGCAACCAAGAAATA GAATCTTTTGATTCAGATGC
Product: phosphatase/phosphohexomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKKNWNFPKAILFDLDGVLIDSEPLHGQAWKETAALFDLNLTLDQLKLLRGKRRIDCANELVKLIPKTVEAKDLLDRHRP ISRQLILRAQAMQGGESLVERCHKNNIPMALVTSSSAESFQIKTTQHKWMNLFSVIVLGDEKLLAKGKPAPDPYLLAAKK LNIAPQECWAVEDSIAGASSALEAGCCVLFLKAQSEELPKKEDLDQHINLRQISHLKEIDQILNEY
Sequences:
>Translated_226_residues MKKNWNFPKAILFDLDGVLIDSEPLHGQAWKETAALFDLNLTLDQLKLLRGKRRIDCANELVKLIPKTVEAKDLLDRHRP ISRQLILRAQAMQGGESLVERCHKNNIPMALVTSSSAESFQIKTTQHKWMNLFSVIVLGDEKLLAKGKPAPDPYLLAAKK LNIAPQECWAVEDSIAGASSALEAGCCVLFLKAQSEELPKKEDLDQHINLRQISHLKEIDQILNEY >Mature_226_residues MKKNWNFPKAILFDLDGVLIDSEPLHGQAWKETAALFDLNLTLDQLKLLRGKRRIDCANELVKLIPKTVEAKDLLDRHRP ISRQLILRAQAMQGGESLVERCHKNNIPMALVTSSSAESFQIKTTQHKWMNLFSVIVLGDEKLLAKGKPAPDPYLLAAKK LNIAPQECWAVEDSIAGASSALEAGCCVLFLKAQSEELPKKEDLDQHINLRQISHLKEIDQILNEY
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=184, Percent_Identity=33.1521739130435, Blast_Score=111, Evalue=4e-25, Organism=Homo sapiens, GI296011028, Length=156, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI207113149, Length=207, Percent_Identity=29.4685990338164, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI296011030, Length=184, Percent_Identity=29.8913043478261, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI87082080, Length=223, Percent_Identity=32.7354260089686, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789046, Length=176, Percent_Identity=25.5681818181818, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554716, Length=192, Percent_Identity=32.8125, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI116008157, Length=184, Percent_Identity=29.3478260869565, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI17137324, Length=184, Percent_Identity=30.4347826086957, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI45550911, Length=178, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI20129151, Length=187, Percent_Identity=28.3422459893048, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25442; Mature: 25442
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNWNFPKAILFDLDGVLIDSEPLHGQAWKETAALFDLNLTLDQLKLLRGKRRIDCANE CCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHEEECCCHHHHHHHHCCCCCCHHHH LVKLIPKTVEAKDLLDRHRPISRQLILRAQAMQGGESLVERCHKNNIPMALVTSSSAESF HHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCE QIKTTQHKWMNLFSVIVLGDEKLLAKGKPAPDPYLLAAKKLNIAPQECWAVEDSIAGASS EEECHHHHHHHHHHHEEECCHHHHHCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHCCCHH ALEAGCCVLFLKAQSEELPKKEDLDQHINLRQISHLKEIDQILNEY HHHCCEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKNWNFPKAILFDLDGVLIDSEPLHGQAWKETAALFDLNLTLDQLKLLRGKRRIDCANE CCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHEEECCCHHHHHHHHCCCCCCHHHH LVKLIPKTVEAKDLLDRHRPISRQLILRAQAMQGGESLVERCHKNNIPMALVTSSSAESF HHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCE QIKTTQHKWMNLFSVIVLGDEKLLAKGKPAPDPYLLAAKKLNIAPQECWAVEDSIAGASS EEECHHHHHHHHHHHEEECCHHHHHCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHCCCHH ALEAGCCVLFLKAQSEELPKKEDLDQHINLRQISHLKEIDQILNEY HHHCCEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]