Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025366
Identifier: 124025366
GI number: 124025366
Start: 601159
End: 601689
Strand: Reverse
Name: 124025366
Synonym: NATL1_06551
Alternate gene names: NA
Gene position: 601689-601159 (Counterclockwise)
Preceding gene: 124025372
Following gene: 124025365
Centisome position: 32.27
GC content: 41.81
Gene sequence:
>531_bases ATGTTCATGGGTGACTCTTACACCAATAATCAATCAGGTGGTGGCGACTTCCAAAACCAAAGACAAAATGGTCGTAATAA TTTCAGAGGTGGCCGAGGTCCTAATAATAGAGAGGGAGGCTTTCGTATTCGCTTAAGTGATAATGAAATGCGAGCAGCCA GATCATTACAAGAAGCCTTTAATCTTCGTTCTACTGTTGCTGTTTTAGGTTTCGCAGTAAGAACTCTTGCCCAAATGCTT GAAGATGGAAGTCTTGAAAATTTAGTCAACGAATATAGGTCTCAAGCGCCCGCCAATGACCAAAGAAGAGGCAGGGGTAA CAGGGGAAACTATAACGGTGAAAATAACAACTCACCCAACACAAAGCCCAACCCTTTTGCAAGACCAGAAAAGCCAGTTA AAGAACAAGAGGTAGCTGATACTGATCAGGCAAACAACGTTGCTCAAGATCCTGCAGAAAAAGATAATGATCAAGCAACA GAAGCAAGTTCAAATGAAGATGATTCCACAAATACAAGCGAGCAAGGATAA
Upstream 100 bases:
>100_bases CGCTGGAATCAATATCATTAGATGTGAAAGTGCTAATCAAGATATTCAAATATGTCGCAAAAGTACCGGCTATGCGTCAC ACTTGCCCCTATTGGCAAAT
Downstream 100 bases:
>100_bases GTGAATCAGAAGAGAGTCTTATCTGGTGTTCAACCCACAGGCGATGTTCATATTGGTAATTGGCTTGGAGCAATAAGAAA TTGGGTTGAATTACAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MFMGDSYTNNQSGGGDFQNQRQNGRNNFRGGRGPNNREGGFRIRLSDNEMRAARSLQEAFNLRSTVAVLGFAVRTLAQML EDGSLENLVNEYRSQAPANDQRRGRGNRGNYNGENNNSPNTKPNPFARPEKPVKEQEVADTDQANNVAQDPAEKDNDQAT EASSNEDDSTNTSEQG
Sequences:
>Translated_176_residues MFMGDSYTNNQSGGGDFQNQRQNGRNNFRGGRGPNNREGGFRIRLSDNEMRAARSLQEAFNLRSTVAVLGFAVRTLAQML EDGSLENLVNEYRSQAPANDQRRGRGNRGNYNGENNNSPNTKPNPFARPEKPVKEQEVADTDQANNVAQDPAEKDNDQAT EASSNEDDSTNTSEQG >Mature_176_residues MFMGDSYTNNQSGGGDFQNQRQNGRNNFRGGRGPNNREGGFRIRLSDNEMRAARSLQEAFNLRSTVAVLGFAVRTLAQML EDGSLENLVNEYRSQAPANDQRRGRGNRGNYNGENNNSPNTKPNPFARPEKPVKEQEVADTDQANNVAQDPAEKDNDQAT EASSNEDDSTNTSEQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19431; Mature: 19431
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMGDSYTNNQSGGGDFQNQRQNGRNNFRGGRGPNNREGGFRIRLSDNEMRAARSLQEAF CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH NLRSTVAVLGFAVRTLAQMLEDGSLENLVNEYRSQAPANDQRRGRGNRGNYNGENNNSPN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCC TKPNPFARPEKPVKEQEVADTDQANNVAQDPAEKDNDQATEASSNEDDSTNTSEQG CCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFMGDSYTNNQSGGGDFQNQRQNGRNNFRGGRGPNNREGGFRIRLSDNEMRAARSLQEAF CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH NLRSTVAVLGFAVRTLAQMLEDGSLENLVNEYRSQAPANDQRRGRGNRGNYNGENNNSPN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCC TKPNPFARPEKPVKEQEVADTDQANNVAQDPAEKDNDQATEASSNEDDSTNTSEQG CCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA