| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025296
Identifier: 124025296
GI number: 124025296
Start: 531392
End: 532279
Strand: Reverse
Name: 124025296
Synonym: NATL1_05851
Alternate gene names: NA
Gene position: 532279-531392 (Counterclockwise)
Preceding gene: 124025297
Following gene: 124025292
Centisome position: 28.54
GC content: 33.56
Gene sequence:
>888_bases GTGATTGCTTCAAAAAGATCTGATTTAAAAAAAACAGACTGGGAAATAGACTTTTATTCCCGCCCAATAATTGATGAAAA TGGAAAAAAAAGATGGGAATTATTAATTACATCTACAAATAATTTCAAAGATAAGAAAACATTTAAATGGGAAAAGATAT GTCCAGCATCAAGTGTTAATTCAATTTGGTTAAAAGATGCCTTTGACGAAGCCATTGATGAAGCTTATTCACAAGGTTGG GATAAACCATCAGTTATTCGATGTTGGCGATCCTCTATGAAAACAATGATAAAACGTGCAGCAGATCAAATAGGAATTGA ACTTATTTCTAGCAGAAGAACATATTCATTATTGGAGTGGCTTATTGAAAGAGAAAGGAGTTTCTATCCTCAGCAAAAAG GGTATACCGGCGTTAATCTTGCTCCTCCTTCAAACCCAATTACAAACCAAGCCATCCCTTTACCAGAAGAAGTAAGAGGT GAATCATGGAGCTTTGCTTCCTTATCTCTAAATACACTTAGAGAGGCTGATGAATGGGAAATAGAGTTTTCTAATTTAAT TCCCATAAAAGATTCAATTAATGAAAATATATCTATTCCAGGTATTAGGCTTTTTAGCCCAAAAAGATCCTTGGCACTTG CAGCTTGGCTAGGTGGACTTGAACCAGCAAAGCTTTTAATAGAAGGTACTCAAATAATTTTAGAGGCAGGGCAAGCTGAT AGATGGTTAGTAACTGATGTCGAAGAAGAAGCTAAAAAAGTTATTGAAAATAATTTTCAAAATACAAAATTATATGCAGA TGGACTTCAATTTATTTCAGTTCAAAAAAGTCCTGAAGAAAATTCTCTAGATGGGTTTTGGATGCTAAAAGATATTGAAG AGTATTAA
Upstream 100 bases:
>100_bases TTAAAGCGAGAAATAGCTTGAATAAAGAAAAAGTTGATCCTCAAAAGGAAAAGGAAGACATCAACTTATCCTCATAACTT TACATTGAAGAAAAAAAATT
Downstream 100 bases:
>100_bases CAATTCCCTCTAAAAACAGAGTTCAAATATAGTTTTGGATTAAACAGAACGCCATAAATAAATAAGGTTATCAACCCTTA AGGATATTAAATTTATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MIASKRSDLKKTDWEIDFYSRPIIDENGKKRWELLITSTNNFKDKKTFKWEKICPASSVNSIWLKDAFDEAIDEAYSQGW DKPSVIRCWRSSMKTMIKRAADQIGIELISSRRTYSLLEWLIERERSFYPQQKGYTGVNLAPPSNPITNQAIPLPEEVRG ESWSFASLSLNTLREADEWEIEFSNLIPIKDSINENISIPGIRLFSPKRSLALAAWLGGLEPAKLLIEGTQIILEAGQAD RWLVTDVEEEAKKVIENNFQNTKLYADGLQFISVQKSPEENSLDGFWMLKDIEEY
Sequences:
>Translated_295_residues MIASKRSDLKKTDWEIDFYSRPIIDENGKKRWELLITSTNNFKDKKTFKWEKICPASSVNSIWLKDAFDEAIDEAYSQGW DKPSVIRCWRSSMKTMIKRAADQIGIELISSRRTYSLLEWLIERERSFYPQQKGYTGVNLAPPSNPITNQAIPLPEEVRG ESWSFASLSLNTLREADEWEIEFSNLIPIKDSINENISIPGIRLFSPKRSLALAAWLGGLEPAKLLIEGTQIILEAGQAD RWLVTDVEEEAKKVIENNFQNTKLYADGLQFISVQKSPEENSLDGFWMLKDIEEY >Mature_295_residues MIASKRSDLKKTDWEIDFYSRPIIDENGKKRWELLITSTNNFKDKKTFKWEKICPASSVNSIWLKDAFDEAIDEAYSQGW DKPSVIRCWRSSMKTMIKRAADQIGIELISSRRTYSLLEWLIERERSFYPQQKGYTGVNLAPPSNPITNQAIPLPEEVRG ESWSFASLSLNTLREADEWEIEFSNLIPIKDSINENISIPGIRLFSPKRSLALAAWLGGLEPAKLLIEGTQIILEAGQAD RWLVTDVEEEAKKVIENNFQNTKLYADGLQFISVQKSPEENSLDGFWMLKDIEEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33963; Mature: 33963
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASKRSDLKKTDWEIDFYSRPIIDENGKKRWELLITSTNNFKDKKTFKWEKICPASSVN CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCC SIWLKDAFDEAIDEAYSQGWDKPSVIRCWRSSMKTMIKRAADQIGIELISSRRTYSLLEW CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LIERERSFYPQQKGYTGVNLAPPSNPITNQAIPLPEEVRGESWSFASLSLNTLREADEWE HHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHHHCCCCCE IEFSNLIPIKDSINENISIPGIRLFSPKRSLALAAWLGGLEPAKLLIEGTQIILEAGQAD EEECCEECCHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCC RWLVTDVEEEAKKVIENNFQNTKLYADGLQFISVQKSPEENSLDGFWMLKDIEEY CEEEECHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCCCCEEEHHHHHCC >Mature Secondary Structure MIASKRSDLKKTDWEIDFYSRPIIDENGKKRWELLITSTNNFKDKKTFKWEKICPASSVN CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCC SIWLKDAFDEAIDEAYSQGWDKPSVIRCWRSSMKTMIKRAADQIGIELISSRRTYSLLEW CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LIERERSFYPQQKGYTGVNLAPPSNPITNQAIPLPEEVRGESWSFASLSLNTLREADEWE HHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHHHCCCCCE IEFSNLIPIKDSINENISIPGIRLFSPKRSLALAAWLGGLEPAKLLIEGTQIILEAGQAD EEECCEECCHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCC RWLVTDVEEEAKKVIENNFQNTKLYADGLQFISVQKSPEENSLDGFWMLKDIEEY CEEEECHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCCCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA