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The map label for this gene is psb27

Identifier: 124025276

GI number: 124025276

Start: 511780

End: 512214

Strand: Reverse

Name: psb27

Synonym: NATL1_05651

Alternate gene names: NA

Gene position: 512214-511780 (Counterclockwise)

Preceding gene: 124025277

Following gene: 124025275

Centisome position: 27.47

GC content: 37.7

Gene sequence:

>435_bases
ATGATTTCTGCCTTTCATCGCCTCTCCATCAGGTTGGTGAGGGCAGCTTTGGCTATATGCCTTGGCTTCTGCCTCATATT
CTTCCAATTCGCTTCAGAAGTGAATGCAGCCAAAACACTAATGACTGGAGATTTTGCGAAAGACACTATTGCAGTCTCAT
CGACTTTAAAAGAGACCATAACTTTACCTAAAGAAGACAAAGGACTATCTGAAGCAGAAAAAGAAGCTGTTTTTCTAATA
AGTGATTACATTTCAAGATATAGGAATCGATCTCAAGTAAACACTTCCACGACCTTTACAACAATGCAGACCGCATTAAA
TGCTTTATCAGGTCATTACAAGACTTTTGCAAACAGACCAGTTCCTGAAAATCTCAAAGAAAGGTTAAATAAAGAATTAT
CTAAAGCAGAGAAATTGGCAGTTAGAGATAGTTAA

Upstream 100 bases:

>100_bases
CTGAACTCCGTTTTAAAAAAGCTTTCTGAAGAATTTAATACTGAAAAACTATAAATTGAGCCCAAAGGACTCTAGAGTCT
TACGTAACTGCAAAAAACAA

Downstream 100 bases:

>100_bases
AGATAATCTTTAATTCATTTCTTTGACTCAGGGTAGGGCTATCTGCAAATCTTATTTCTTCTAAAGTAAATCGGTTTCGA
GCCGAATTTTCTTCCTTGGC

Product: putative photosystem II reaction center Psb27 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MISAFHRLSIRLVRAALAICLGFCLIFFQFASEVNAAKTLMTGDFAKDTIAVSSTLKETITLPKEDKGLSEAEKEAVFLI
SDYISRYRNRSQVNTSTTFTTMQTALNALSGHYKTFANRPVPENLKERLNKELSKAEKLAVRDS

Sequences:

>Translated_144_residues
MISAFHRLSIRLVRAALAICLGFCLIFFQFASEVNAAKTLMTGDFAKDTIAVSSTLKETITLPKEDKGLSEAEKEAVFLI
SDYISRYRNRSQVNTSTTFTTMQTALNALSGHYKTFANRPVPENLKERLNKELSKAEKLAVRDS
>Mature_144_residues
MISAFHRLSIRLVRAALAICLGFCLIFFQFASEVNAAKTLMTGDFAKDTIAVSSTLKETITLPKEDKGLSEAEKEAVFLI
SDYISRYRNRSQVNTSTTFTTMQTALNALSGHYKTFANRPVPENLKERLNKELSKAEKLAVRDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017488 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16085; Mature: 16085

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAFHRLSIRLVRAALAICLGFCLIFFQFASEVNAAKTLMTGDFAKDTIAVSSTLKETI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TLPKEDKGLSEAEKEAVFLISDYISRYRNRSQVNTSTTFTTMQTALNALSGHYKTFANRP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VPENLKERLNKELSKAEKLAVRDS
CCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISAFHRLSIRLVRAALAICLGFCLIFFQFASEVNAAKTLMTGDFAKDTIAVSSTLKETI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TLPKEDKGLSEAEKEAVFLISDYISRYRNRSQVNTSTTFTTMQTALNALSGHYKTFANRP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VPENLKERLNKELSKAEKLAVRDS
CCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]