| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025267
Identifier: 124025267
GI number: 124025267
Start: 504878
End: 505969
Strand: Reverse
Name: 124025267
Synonym: NATL1_05561
Alternate gene names: NA
Gene position: 505969-504878 (Counterclockwise)
Preceding gene: 124025268
Following gene: 124025264
Centisome position: 27.13
GC content: 33.42
Gene sequence:
>1092_bases ATGTCAAATATAGCTTCAGCTATAAAAGCTACTGAAGCGGCCCTTGAAAAAGGTGATTACGGTATTTGCATAAAAATAAT TGACCCTTTACTTCTAGATTTCCAAGCAGAGACAGAAATTGGAGGACAACTTAGACTCCTCATCGTTACTGCATACATGG GGAAAGGTAATGAACAAAAGGCGATCAACATCTGTCAAACATTAATTCATAATAAAGAAGAAAGCATCCGTCAACAAGCT AAACAGCTTTTATCAATACTTGACGCTCCACGTCTACCAAAACCATCAAACTGGTCGGTAGAGATACCAAAGTTAGAGAT GGAGCCATCTCTAAAATCGTCAGTTAGCAAAGCAAAAAAGAAGAGGGAGAAAATTTATCATCCTCCAACTGGTCCAACAA AAAATCTAGACTTTGGATTTTCAATAATAACTTTATTAATTATTTTATTAATAACATTCCTTTTGAGTGGTTGCGTTGAT ATATCAACAAACTTGAGTGTTACAGGTCCGGATCGACTAAAGATTTCACTTGATATAGATAGTAATTATGGTGAATCAAT TCCATGGCAGATGGAATTTGAAGAAAATCTTAGTAAAAAACATAGTATCCTAAAACTCCAAACTCATGAAGATAAGCAGC ATTTTGAATCACCAACTATTCGTTTTGAAGAAGTAAATAAATTATTTCAAGAAATAGTTTTAGTAGCTTCAAAAGCTAGC GGATTCAGTATAAATAAACCTGAAATAATTACAAACAACAAAAACTGGATAATTGGTACAAGTCAAAATTTTAAGATTTA TTTTGATTTGAGAGAAATCCCAAAAATTCCGGGATTAACACTAAACATCGTCATTGATGGTATTGACAATAAAAATAATT TTAAAACCAAACCTCTAGAACCTACTTTTAATCAAGGTTTAACTTCCTTTCCTATTGAAATTGGACAGATTAACCAACTG GAGATTTCAAATTGGAAATGGAACCAAATTTCAGTTGGGATTATCTTGATAATTGCTTTAACTTTGCTGAGCTTATCCCT TCAGAGATTACGTCTACAAATGGGCTTCGGTTTCCCCGAGCTACCACCTTAA
Upstream 100 bases:
>100_bases TAATGCTGCCCATATCATTGACGGAAGGACTCCTCACTCACTTCTTTTAGAAGTTTTCACTGATGCAGGTATTGGAACAA TGGTTATGGGTAGAGGTTAA
Downstream 100 bases:
>100_bases AAAAAGATAAAACTCATAATTGTAGAGGATCAGGATCAATAGAAAGAGTTACTCCTTTTGGTAAATCTTTCCATAATTCA GGTCCATAAGGGAGTGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSNIASAIKATEAALEKGDYGICIKIIDPLLLDFQAETEIGGQLRLLIVTAYMGKGNEQKAINICQTLIHNKEESIRQQA KQLLSILDAPRLPKPSNWSVEIPKLEMEPSLKSSVSKAKKKREKIYHPPTGPTKNLDFGFSIITLLIILLITFLLSGCVD ISTNLSVTGPDRLKISLDIDSNYGESIPWQMEFEENLSKKHSILKLQTHEDKQHFESPTIRFEEVNKLFQEIVLVASKAS GFSINKPEIITNNKNWIIGTSQNFKIYFDLREIPKIPGLTLNIVIDGIDNKNNFKTKPLEPTFNQGLTSFPIEIGQINQL EISNWKWNQISVGIILIIALTLLSLSLQRLRLQMGFGFPELPP
Sequences:
>Translated_363_residues MSNIASAIKATEAALEKGDYGICIKIIDPLLLDFQAETEIGGQLRLLIVTAYMGKGNEQKAINICQTLIHNKEESIRQQA KQLLSILDAPRLPKPSNWSVEIPKLEMEPSLKSSVSKAKKKREKIYHPPTGPTKNLDFGFSIITLLIILLITFLLSGCVD ISTNLSVTGPDRLKISLDIDSNYGESIPWQMEFEENLSKKHSILKLQTHEDKQHFESPTIRFEEVNKLFQEIVLVASKAS GFSINKPEIITNNKNWIIGTSQNFKIYFDLREIPKIPGLTLNIVIDGIDNKNNFKTKPLEPTFNQGLTSFPIEIGQINQL EISNWKWNQISVGIILIIALTLLSLSLQRLRLQMGFGFPELPP >Mature_362_residues SNIASAIKATEAALEKGDYGICIKIIDPLLLDFQAETEIGGQLRLLIVTAYMGKGNEQKAINICQTLIHNKEESIRQQAK QLLSILDAPRLPKPSNWSVEIPKLEMEPSLKSSVSKAKKKREKIYHPPTGPTKNLDFGFSIITLLIILLITFLLSGCVDI STNLSVTGPDRLKISLDIDSNYGESIPWQMEFEENLSKKHSILKLQTHEDKQHFESPTIRFEEVNKLFQEIVLVASKASG FSINKPEIITNNKNWIIGTSQNFKIYFDLREIPKIPGLTLNIVIDGIDNKNNFKTKPLEPTFNQGLTSFPIEIGQINQLE ISNWKWNQISVGIILIIALTLLSLSLQRLRLQMGFGFPELPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40845; Mature: 40714
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIASAIKATEAALEKGDYGICIKIIDPLLLDFQAETEIGGQLRLLIVTAYMGKGNEQK CCHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCHH AINICQTLIHNKEESIRQQAKQLLSILDAPRLPKPSNWSVEIPKLEMEPSLKSSVSKAKK HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEECCCCHHHHHHHHHH KREKIYHPPTGPTKNLDFGFSIITLLIILLITFLLSGCVDISTNLSVTGPDRLKISLDID HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCEEEECCCEEEEEEEEC SNYGESIPWQMEFEENLSKKHSILKLQTHEDKQHFESPTIRFEEVNKLFQEIVLVASKAS CCCCCCCCEEEEHHHHHHHHHCEEEEECCCCHHHHCCCCEEHHHHHHHHHHHHHHHCCCC GFSINKPEIITNNKNWIIGTSQNFKIYFDLREIPKIPGLTLNIVIDGIDNKNNFKTKPLE CCCCCCCEEEECCCCEEEECCCCEEEEEEHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC PTFNQGLTSFPIEIGQINQLEISNWKWNQISVGIILIIALTLLSLSLQRLRLQMGFGFPE CHHHCCCEECCEEECCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LPP CCC >Mature Secondary Structure SNIASAIKATEAALEKGDYGICIKIIDPLLLDFQAETEIGGQLRLLIVTAYMGKGNEQK CHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCHH AINICQTLIHNKEESIRQQAKQLLSILDAPRLPKPSNWSVEIPKLEMEPSLKSSVSKAKK HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEECCCCHHHHHHHHHH KREKIYHPPTGPTKNLDFGFSIITLLIILLITFLLSGCVDISTNLSVTGPDRLKISLDID HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCEEEECCCEEEEEEEEC SNYGESIPWQMEFEENLSKKHSILKLQTHEDKQHFESPTIRFEEVNKLFQEIVLVASKAS CCCCCCCCEEEEHHHHHHHHHCEEEEECCCCHHHHCCCCEEHHHHHHHHHHHHHHHCCCC GFSINKPEIITNNKNWIIGTSQNFKIYFDLREIPKIPGLTLNIVIDGIDNKNNFKTKPLE CCCCCCCEEEECCCCEEEECCCCEEEEEEHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC PTFNQGLTSFPIEIGQINQLEISNWKWNQISVGIILIIALTLLSLSLQRLRLQMGFGFPE CHHHCCCEECCEEECCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LPP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA