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The map label for this gene is 124025245

Identifier: 124025245

GI number: 124025245

Start: 483720

End: 484484

Strand: Reverse

Name: 124025245

Synonym: NATL1_05341

Alternate gene names: NA

Gene position: 484484-483720 (Counterclockwise)

Preceding gene: 124025251

Following gene: 124025243

Centisome position: 25.98

GC content: 29.28

Gene sequence:

>765_bases
ATGAAAAAAAGCTTGTCAGACAAATCAAGGTTTAAAGGTTTAAAAATTGCCATAACCGGTGCGAATGGAAGCCTAGGCAA
GTCTCTTATTGAGGTTCTAAAAAAAGAAGGGGCTTATCTAATTGGCTTAACTCATGACAAAAAGAATAATAGTAACTCTG
AGGGAAGCAAACCTGACGAATGGATTCTATGGTCCTGTGGAAAAGAAAGACTCCTTTCAAGTAGTCTTGCCAATGTTGAC
ATTTTAATACTTAATCATGGATTTAATCCAAAAGGCATGATTGAATCAAATGAAATAAATAAAGCCTTAGAAATAAATTC
CCTTAGTCATTTGAGATTAATAGAAATCTTTGAGGATTTAGCCCTATCAAATAATTTAAATAAGTACAATTCTAAGGAAG
TATGGGTAAATACATCTGAAGCAGAGATTCAAATAGCTTTTAGTCCAGTATATGAAATAACAAAACGTCTAATAGGTGAA
CTTATAAGTTTAAAAAAAAGTAAATTATTAATGGAAAAAAGAAATTCTTTTATCATCAAAAAATTAATATTAGGTCCTTT
TAAATCGAAATTAAATCCACAAGGAATCATGAGCCCTGAATTTGTGGCAAAAAAAATAGTTCAAAAAGCAAAAAAAGAGG
ATTATTTAGTAATAGTATCTCCTAATCCCATAACACATTTGATAATGCCATTCGTTGAATTAATTAGAATATTCTATTCA
AGATTTATAAATAAAATCTACTCAAATACCACCCCTTTAAAATAA

Upstream 100 bases:

>100_bases
AAAAAAGTTCTCAACACTAAATCTATATAAAATTCTAATTAGACAACGATTCTCCAGTAATTCCTGATTTTTTCACAAGA
AATACAATGAATTCAACTAA

Downstream 100 bases:

>100_bases
AATCAATCACCTCTATCAGTTAATATCTCACAACCATTTTTTGTGACCAAAACAGTATGTTCCCATTGAGCAGATAGATT
TCCATCTTTTGTAATGACTG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: Bifunctional Sterol Desaturase/Short Chain Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short-Chain Dehydrogenase; Short-Chain Dehydrogenase/Reductase Family Protein; Fatty Acid Hydroxylase; Dehydrogenases With Different Specificities; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKKSLSDKSRFKGLKIAITGANGSLGKSLIEVLKKEGAYLIGLTHDKKNNSNSEGSKPDEWILWSCGKERLLSSSLANVD
ILILNHGFNPKGMIESNEINKALEINSLSHLRLIEIFEDLALSNNLNKYNSKEVWVNTSEAEIQIAFSPVYEITKRLIGE
LISLKKSKLLMEKRNSFIIKKLILGPFKSKLNPQGIMSPEFVAKKIVQKAKKEDYLVIVSPNPITHLIMPFVELIRIFYS
RFINKIYSNTTPLK

Sequences:

>Translated_254_residues
MKKSLSDKSRFKGLKIAITGANGSLGKSLIEVLKKEGAYLIGLTHDKKNNSNSEGSKPDEWILWSCGKERLLSSSLANVD
ILILNHGFNPKGMIESNEINKALEINSLSHLRLIEIFEDLALSNNLNKYNSKEVWVNTSEAEIQIAFSPVYEITKRLIGE
LISLKKSKLLMEKRNSFIIKKLILGPFKSKLNPQGIMSPEFVAKKIVQKAKKEDYLVIVSPNPITHLIMPFVELIRIFYS
RFINKIYSNTTPLK
>Mature_254_residues
MKKSLSDKSRFKGLKIAITGANGSLGKSLIEVLKKEGAYLIGLTHDKKNNSNSEGSKPDEWILWSCGKERLLSSSLANVD
ILILNHGFNPKGMIESNEINKALEINSLSHLRLIEIFEDLALSNNLNKYNSKEVWVNTSEAEIQIAFSPVYEITKRLIGE
LISLKKSKLLMEKRNSFIIKKLILGPFKSKLNPQGIMSPEFVAKKIVQKAKKEDYLVIVSPNPITHLIMPFVELIRIFYS
RFINKIYSNTTPLK

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28717; Mature: 28717

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLSDKSRFKGLKIAITGANGSLGKSLIEVLKKEGAYLIGLTHDKKNNSNSEGSKPDE
CCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
WILWSCGKERLLSSSLANVDILILNHGFNPKGMIESNEINKALEINSLSHLRLIEIFEDL
EEEECCCHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCCHHEECCCCHHHHHHHHHHH
ALSNNLNKYNSKEVWVNTSEAEIQIAFSPVYEITKRLIGELISLKKSKLLMEKRNSFIIK
HHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLILGPFKSKLNPQGIMSPEFVAKKIVQKAKKEDYLVIVSPNPITHLIMPFVELIRIFYS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
RFINKIYSNTTPLK
HHHHHHHCCCCCCC
>Mature Secondary Structure
MKKSLSDKSRFKGLKIAITGANGSLGKSLIEVLKKEGAYLIGLTHDKKNNSNSEGSKPDE
CCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
WILWSCGKERLLSSSLANVDILILNHGFNPKGMIESNEINKALEINSLSHLRLIEIFEDL
EEEECCCHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCCHHEECCCCHHHHHHHHHHH
ALSNNLNKYNSKEVWVNTSEAEIQIAFSPVYEITKRLIGELISLKKSKLLMEKRNSFIIK
HHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLILGPFKSKLNPQGIMSPEFVAKKIVQKAKKEDYLVIVSPNPITHLIMPFVELIRIFYS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
RFINKIYSNTTPLK
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA