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The map label for this gene is ldcA [C]

Identifier: 124025221

GI number: 124025221

Start: 464655

End: 465530

Strand: Reverse

Name: ldcA [C]

Synonym: NATL1_05101

Alternate gene names: 124025221

Gene position: 465530-464655 (Counterclockwise)

Preceding gene: 124025222

Following gene: 124025219

Centisome position: 24.96

GC content: 41.21

Gene sequence:

>876_bases
ATGACTGAACCTATAAAGAAAGGAGATCATTTCCACATAGTTGCGGCAAGTTCGCCAATAACTAAAAAAGAAGATCTTCA
CTCAGGGATCAAAGTCCTTCAGGAATGGGGATTGATATGTAACCATTTCGATGAAATAGATAGGTCATGGGGTTATTTAG
CAGGTAATGATGAAGTTAGATTTAATGAATTACACCCAAGCAAACATTACCCTCTCTTAGCTTTTGCTAGAGGTGGGTGG
GGATCAGCAAGATTGCTAGAAAAACAACAACCATGGAAAGAAGGTTGGATGATAGGCTTTTCTGATTTGACTTCCATACT
TCTTGCGCGGCTAGCCAGTGGATTTCAAGGAGGCATTCATGGTCCACTAATTACAACTTTAGGTTCCGAACCAGATTGGA
GTAAAGACAGGCTTAAATCAATTTTGTTTGGCAATTGCGTACCAGATATTTATGGGGAGCCGTGGGGGGGAGGAATTTCA
AAGGGGCGTCTGATAGTTGGCAACCTCACTGTCCTGACTCACTTAATTGGGACTGAACATCTCCCAAGTTTCAAAAAATC
AATTCTAATCATCGAAGATATTGGAGAAGCTCCCTACAGAATTGACAGAATGCTAACTCACTTAAGATTGGCTGGAGTTC
TACATCAGCTATCTGGTCTAGGTTTTGGTTCATTTACAAGGTGTGATGATGAGAAGGACGTCGACAAATCAAAGACGTTT
AAGCTTCTTGATATTTTCAAAGATCGAACACAAGACCTTAAAATCCCAATCGTTTCAAGTCTGCCTATTGGACACTGCTG
TGGGAATGCATCACTTCCACTAGGTAGTCAAGCCATCTTGAATGGCGACAAAGGGAGCCTTAGTCTTTTAAAGTAG

Upstream 100 bases:

>100_bases
GGTTTGCATTTCAGCAATCAAGTGAGACTTGGCAGCTTATTACTTCTTGGCATGGTCTTCAGCAAGATTATTTAATTAAT
ATACTGACCAAGATTCGCAA

Downstream 100 bases:

>100_bases
ACAATAAAGACTCTGCTATTACGAGATCAAATGGAGTTGTCACTTTAATATTTGAAGGTCCCGCATCATATATTTTCACT
GTCAATCCTAAACGTTCAAA

Product: putative carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTEPIKKGDHFHIVAASSPITKKEDLHSGIKVLQEWGLICNHFDEIDRSWGYLAGNDEVRFNELHPSKHYPLLAFARGGW
GSARLLEKQQPWKEGWMIGFSDLTSILLARLASGFQGGIHGPLITTLGSEPDWSKDRLKSILFGNCVPDIYGEPWGGGIS
KGRLIVGNLTVLTHLIGTEHLPSFKKSILIIEDIGEAPYRIDRMLTHLRLAGVLHQLSGLGFGSFTRCDDEKDVDKSKTF
KLLDIFKDRTQDLKIPIVSSLPIGHCCGNASLPLGSQAILNGDKGSLSLLK

Sequences:

>Translated_291_residues
MTEPIKKGDHFHIVAASSPITKKEDLHSGIKVLQEWGLICNHFDEIDRSWGYLAGNDEVRFNELHPSKHYPLLAFARGGW
GSARLLEKQQPWKEGWMIGFSDLTSILLARLASGFQGGIHGPLITTLGSEPDWSKDRLKSILFGNCVPDIYGEPWGGGIS
KGRLIVGNLTVLTHLIGTEHLPSFKKSILIIEDIGEAPYRIDRMLTHLRLAGVLHQLSGLGFGSFTRCDDEKDVDKSKTF
KLLDIFKDRTQDLKIPIVSSLPIGHCCGNASLPLGSQAILNGDKGSLSLLK
>Mature_290_residues
TEPIKKGDHFHIVAASSPITKKEDLHSGIKVLQEWGLICNHFDEIDRSWGYLAGNDEVRFNELHPSKHYPLLAFARGGWG
SARLLEKQQPWKEGWMIGFSDLTSILLARLASGFQGGIHGPLITTLGSEPDWSKDRLKSILFGNCVPDIYGEPWGGGISK
GRLIVGNLTVLTHLIGTEHLPSFKKSILIIEDIGEAPYRIDRMLTHLRLAGVLHQLSGLGFGSFTRCDDEKDVDKSKTFK
LLDIFKDRTQDLKIPIVSSLPIGHCCGNASLPLGSQAILNGDKGSLSLLK

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=294, Percent_Identity=28.2312925170068, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32084; Mature: 31953

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPIKKGDHFHIVAASSPITKKEDLHSGIKVLQEWGLICNHFDEIDRSWGYLAGNDEVR
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEE
FNELHPSKHYPLLAFARGGWGSARLLEKQQPWKEGWMIGFSDLTSILLARLASGFQGGIH
EECCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHCCEECHHHHHHHHHHHHHHCCCCCCC
GPLITTLGSEPDWSKDRLKSILFGNCVPDIYGEPWGGGISKGRLIVGNLTVLTHLIGTEH
CCHHEECCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC
LPSFKKSILIIEDIGEAPYRIDRMLTHLRLAGVLHQLSGLGFGSFTRCDDEKDVDKSKTF
CCCHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
KLLDIFKDRTQDLKIPIVSSLPIGHCCGNASLPLGSQAILNGDKGSLSLLK
HHHHHHHCCCCCCCCEEECCCCCHHCCCCCCCCCCCHHEECCCCCCEECCC
>Mature Secondary Structure 
TEPIKKGDHFHIVAASSPITKKEDLHSGIKVLQEWGLICNHFDEIDRSWGYLAGNDEVR
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEE
FNELHPSKHYPLLAFARGGWGSARLLEKQQPWKEGWMIGFSDLTSILLARLASGFQGGIH
EECCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHCCEECHHHHHHHHHHHHHHCCCCCCC
GPLITTLGSEPDWSKDRLKSILFGNCVPDIYGEPWGGGISKGRLIVGNLTVLTHLIGTEH
CCHHEECCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC
LPSFKKSILIIEDIGEAPYRIDRMLTHLRLAGVLHQLSGLGFGSFTRCDDEKDVDKSKTF
CCCHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
KLLDIFKDRTQDLKIPIVSSLPIGHCCGNASLPLGSQAILNGDKGSLSLLK
HHHHHHHCCCCCCCCEEECCCCCHHCCCCCCCCCCCHHEECCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]