Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025198
Identifier: 124025198
GI number: 124025198
Start: 441288
End: 441707
Strand: Reverse
Name: 124025198
Synonym: NATL1_04851
Alternate gene names: NA
Gene position: 441707-441288 (Counterclockwise)
Preceding gene: 124025201
Following gene: 124025195
Centisome position: 23.69
GC content: 35.48
Gene sequence:
>420_bases TTGGAAGAAATCAAGTCTTCATGGAAAGAGAATGTCGGGGGACTTATTCAAGATTGGGTAGAAATAGCTGGGGAGCAACT CGCATTAAATTGCACACCACTTAATATTCAAAATAAAATTTTAACGATTGGAGCAAGTCATCCTCAGTGGAGACAGGCTC TCCAATACAACCGCTTAGAATTAATTCAGTCTTTAAAATCATATGGCTATCAAATAAAAGAGATTCGGATTAGACAATAT TATCCCAATGATTTAGTTACTAGAGAGAGTGAAAAAGAAATATGGGAAAAGCACCCAAGTAGAACTGATAAGACTGGAAT CACCAATTGTCCTTTTTGTAAAGTCCCATCTCCCAAGGGAGAAGTTAAATTATGGGGTAAATGTAGTTTTTGTAGAAGAA AAGAATTGAGAATAGATTGA
Upstream 100 bases:
>100_bases ATTTAAGCACTAACTCACCAATAGTGTCTAATTAAAATTGATTTTAGAAGACTTAAAGCACAAAGCAAAAGGAAAAAGAG AGCAGTCAATTTATACATGT
Downstream 100 bases:
>100_bases ACGATTTTGATTTAGGCTTCAAGTAATAAAATCCCCATTTGTCCCATTGCTAATGTTTGGTATTTTGCTTTTTTGAAACC CGCAGAAAGTGCCAAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MEEIKSSWKENVGGLIQDWVEIAGEQLALNCTPLNIQNKILTIGASHPQWRQALQYNRLELIQSLKSYGYQIKEIRIRQY YPNDLVTRESEKEIWEKHPSRTDKTGITNCPFCKVPSPKGEVKLWGKCSFCRRKELRID
Sequences:
>Translated_139_residues MEEIKSSWKENVGGLIQDWVEIAGEQLALNCTPLNIQNKILTIGASHPQWRQALQYNRLELIQSLKSYGYQIKEIRIRQY YPNDLVTRESEKEIWEKHPSRTDKTGITNCPFCKVPSPKGEVKLWGKCSFCRRKELRID >Mature_139_residues MEEIKSSWKENVGGLIQDWVEIAGEQLALNCTPLNIQNKILTIGASHPQWRQALQYNRLELIQSLKSYGYQIKEIRIRQY YPNDLVTRESEKEIWEKHPSRTDKTGITNCPFCKVPSPKGEVKLWGKCSFCRRKELRID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16279; Mature: 16279
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIKSSWKENVGGLIQDWVEIAGEQLALNCTPLNIQNKILTIGASHPQWRQALQYNRLE CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHH LIQSLKSYGYQIKEIRIRQYYPNDLVTRESEKEIWEKHPSRTDKTGITNCPFCKVPSPKG HHHHHHHCCCEEEEEEEEEECCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC EVKLWGKCSFCRRKELRID CEEEECCCCCHHCCCCCCC >Mature Secondary Structure MEEIKSSWKENVGGLIQDWVEIAGEQLALNCTPLNIQNKILTIGASHPQWRQALQYNRLE CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHH LIQSLKSYGYQIKEIRIRQYYPNDLVTRESEKEIWEKHPSRTDKTGITNCPFCKVPSPKG HHHHHHHCCCEEEEEEEEEECCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC EVKLWGKCSFCRRKELRID CEEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA