Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
---|---|
Accession | NC_008819 |
Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025195
Identifier: 124025195
GI number: 124025195
Start: 439451
End: 439672
Strand: Reverse
Name: 124025195
Synonym: NATL1_04821
Alternate gene names: NA
Gene position: 439672-439451 (Counterclockwise)
Preceding gene: 124025198
Following gene: 124025194
Centisome position: 23.58
GC content: 37.39
Gene sequence:
>222_bases ATGGCTAAGCCAACCTCCCTTTCAAGGATAGGTTCAAAAATTAAGATTAATATTGAACGTGTTCGAGATCGCATACCTTC TTATCTGATAGACCAACTGTCAGAAGATCCAAGAGGTACTGTAATTGACTATAAAATGACTGATGGAAGAGGTGGTATTG GAGTGGTAATTAAGATGAATGATGGGAGCAAACATTGGTTCTTCGAAGATGAAGTTTCTTAA
Upstream 100 bases:
>100_bases TCGTCCGTTTGAAACATCAAGACAAGGAATCAATCTTAAAGCAACCATGATTTTTACACAGAGGAACTGTTAAGGTGCCG AAATCAAGTAATTTAATTCC
Downstream 100 bases:
>100_bases CCCTGAGATTACAAAGTGAGCGATGCTAGGCAACTCCTTGGGATAAAAGGAGGTTCTGAAACAACAAACATTTGGAAGCT TCGTTTGCAATTGATGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MAKPTSLSRIGSKIKINIERVRDRIPSYLIDQLSEDPRGTVIDYKMTDGRGGIGVVIKMNDGSKHWFFEDEVS
Sequences:
>Translated_73_residues MAKPTSLSRIGSKIKINIERVRDRIPSYLIDQLSEDPRGTVIDYKMTDGRGGIGVVIKMNDGSKHWFFEDEVS >Mature_72_residues AKPTSLSRIGSKIKINIERVRDRIPSYLIDQLSEDPRGTVIDYKMTDGRGGIGVVIKMNDGSKHWFFEDEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8269; Mature: 8137
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPTSLSRIGSKIKINIERVRDRIPSYLIDQLSEDPRGTVIDYKMTDGRGGIGVVIKMN CCCCCCHHHCCCEEEEEHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEC DGSKHWFFEDEVS CCCCCEEEECCCC >Mature Secondary Structure AKPTSLSRIGSKIKINIERVRDRIPSYLIDQLSEDPRGTVIDYKMTDGRGGIGVVIKMN CCCCCHHHCCCEEEEEHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEC DGSKHWFFEDEVS CCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA