| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025144
Identifier: 124025144
GI number: 124025144
Start: 400218
End: 400499
Strand: Reverse
Name: 124025144
Synonym: NATL1_04311
Alternate gene names: NA
Gene position: 400499-400218 (Counterclockwise)
Preceding gene: 124025154
Following gene: 124025141
Centisome position: 21.48
GC content: 32.62
Gene sequence:
>282_bases ATGAGCTCCGAACCTGATAATTTACAAACACTTATCAGTAAGTACAGAACTATGGACATATATGAATTAGAAGCAAATAT CGATAACTGGAATAAAGAGAATGATTGCCCAATTCAAACTCAATGCCTTGTTATTGCAAAAAACGAACTAGAAATTAAAT ACAAAGAGAGACAAGAACAAATAGAACTTTTAACTAAATCCCTCACTTCTTCTTCACGAGCTGGGAGATGGGTTTCTAGT GTTAAAGCCGTTATTAAACAGCTTCTAAAATTCAAGAAATAA
Upstream 100 bases:
>100_bases AGTATAAACAGCCCAAACACGAGTGAGTTTACCCACCATTGATATTTTGTTTACAGGCTATATTTTGTGAATCAAATCCA CGCCAAATAAATCATTTTTC
Downstream 100 bases:
>100_bases AAGCCATATCATTTTCAGAAGTTGTTGTATCAGTTAGTCCCACGTTGAAATATCCGTAGTGCCTTGTGATCGTTGCATCC ATGCAATCTTCCATATGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSSEPDNLQTLISKYRTMDIYELEANIDNWNKENDCPIQTQCLVIAKNELEIKYKERQEQIELLTKSLTSSSRAGRWVSS VKAVIKQLLKFKK
Sequences:
>Translated_93_residues MSSEPDNLQTLISKYRTMDIYELEANIDNWNKENDCPIQTQCLVIAKNELEIKYKERQEQIELLTKSLTSSSRAGRWVSS VKAVIKQLLKFKK >Mature_92_residues SSEPDNLQTLISKYRTMDIYELEANIDNWNKENDCPIQTQCLVIAKNELEIKYKERQEQIELLTKSLTSSSRAGRWVSSV KAVIKQLLKFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10865; Mature: 10733
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEPDNLQTLISKYRTMDIYELEANIDNWNKENDCPIQTQCLVIAKNELEIKYKERQEQ CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHH IELLTKSLTSSSRAGRWVSSVKAVIKQLLKFKK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSEPDNLQTLISKYRTMDIYELEANIDNWNKENDCPIQTQCLVIAKNELEIKYKERQEQ CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHH IELLTKSLTSSSRAGRWVSSVKAVIKQLLKFKK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA