| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025132
Identifier: 124025132
GI number: 124025132
Start: 383719
End: 385170
Strand: Reverse
Name: 124025132
Synonym: NATL1_04191
Alternate gene names: NA
Gene position: 385170-383719 (Counterclockwise)
Preceding gene: 124025133
Following gene: 124025129
Centisome position: 20.66
GC content: 39.81
Gene sequence:
>1452_bases ATGCCCGCACGTTTTAGCCAACAGAACCAAAGGGTACGCCCCAACTCGAATGAAGACAAAGTTGTTGCAAGAGCTAAAGA ACATTTTGAAAAAACTCTGATTCAAATTTCTGGAGATATTGCAGGTAGTGTCGCAGCCTTAGAGCATCCAACAAAAAATG ATGCTCTTAATTACGGAGAAATCTTTTTAAGGGATAACGTCCCTGTAATGATCTATCTCTTAACTCAAAAAAGATATGAC ATAGTCAAAAAATTTTTGACAGTAAGTCTCGATTTGCAAAGTACCACTTATCAAACTCGAGGGGTTTTCCCGACAAGTTT TGTTGAAGAAAAAGGGAAATTAATAGCAGATTATGGTCAGAGGTCTATTGGAAGAATTACCTCTGCAGATGCAAGCTTAT GGTGGCCAGTACTTTGTTGGCTGTATGTGAGAAAAAGTGGTGATCAAAGTTTTGGGACGAGTCAACAAGTGCAAAGAGGT GTGCAACTTCTTCTTGATTTAGTTTTGCATCCAACCTTCGAGGGGAATCCAGTTTTATTCGTGCCAGATTGTTCATTTAT GATCGATCGACCCATGGATGTTTGGGGAGCTCCTCTTGAGGTAGAGGTTTTGTTGCATGCATCTTTAAAAAGCTGCATAC AACTAATGGAACTAAGCAGAAAACATCAAAAAAGTCGATTGCTCGATCAGAGGCTTGTTTTAACACGTCAGTGGGTGCAT GATCTTCGCCAATTTCTTTTGAAGCATTATTGGGTTACAAGCAAAACGATGCAAGTTCTTAGAAGAAGACCTACAGAACA ATATGGTGAAGATCAACATCAAAATGAATTCAATGTCCAACCCCAAGTAGTCCCTTCATGGCTTCAGGATTGGCTTGAAA ATAGAGGTGGATACCTTATTGGAAATATAAGAACTGGTAGGCCAGATTTTCGTTTTTACAGCTTGGGGAATTCATTAGCA TGCATGTTTGGAGTATTGACAGCACCTCAACAAAGAGCATTGTTTCGTCTGGTTCTACATAACCGTGAACACCTCATGGC ACAAATGCCAATGAGGATATGCCATCCTCCAATGGATGTCGAAGAATGGCAAAACAAAACAGGTTCAGACCCAAAAAACT GGCCATGGAGCTACCACAATGGGGGCCATTGGCCTAGTCTTTTATGGTTTTTTGGTGCTTCTATATTGCTTCATGAAAAA CGATATCCAAAAGCTGATGTTTTACTCATGGGACAAATGAGGGCTCTTATTGAAGAATGTTATTGGAGTCAATTGAACCA ACTCCCTAGACAAAAATGGGCAGAATATTTTGATGGGCCAACTGGCACTTGGGTAGGACAACAATCTAGGACTTATCAAA CATGGACTATTGTTGGATTTTTATTAATGCATCATTTGTTAAGAGCTGAACCTGATGATGTATTGATGCTGGACTTAGAG GAAGAATTCTAA
Upstream 100 bases:
>100_bases TACTTGCAACAAAGTTGCAAATGAAATGTTTTACCTCTTACTATCAATATTAAATGAGTAAGCCATAACTAGCTTTTAGC GATGGCAACAGATTATCTTA
Downstream 100 bases:
>100_bases AACAAACCTAAAGTAAGAGATTTATCAATTGGTAGGCAGGCTCCTATACCTAAATACATTGTCAAAACAGTTCCAAATAA AAATAATGACATTGCAACTG
Product: putative neutral invertase-like protein
Products: NA
Alternate protein names: Neutral Invertase-Like Protein; Neutral Invertase Like Protein; Plant Neutral Invertase Superfamily; LIM17 Protein
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MPARFSQQNQRVRPNSNEDKVVARAKEHFEKTLIQISGDIAGSVAALEHPTKNDALNYGEIFLRDNVPVMIYLLTQKRYD IVKKFLTVSLDLQSTTYQTRGVFPTSFVEEKGKLIADYGQRSIGRITSADASLWWPVLCWLYVRKSGDQSFGTSQQVQRG VQLLLDLVLHPTFEGNPVLFVPDCSFMIDRPMDVWGAPLEVEVLLHASLKSCIQLMELSRKHQKSRLLDQRLVLTRQWVH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGEDQHQNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLTAPQQRALFRLVLHNREHLMAQMPMRICHPPMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHEK RYPKADVLLMGQMRALIEECYWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHLLRAEPDDVLMLDLE EEF
Sequences:
>Translated_483_residues MPARFSQQNQRVRPNSNEDKVVARAKEHFEKTLIQISGDIAGSVAALEHPTKNDALNYGEIFLRDNVPVMIYLLTQKRYD IVKKFLTVSLDLQSTTYQTRGVFPTSFVEEKGKLIADYGQRSIGRITSADASLWWPVLCWLYVRKSGDQSFGTSQQVQRG VQLLLDLVLHPTFEGNPVLFVPDCSFMIDRPMDVWGAPLEVEVLLHASLKSCIQLMELSRKHQKSRLLDQRLVLTRQWVH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGEDQHQNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLTAPQQRALFRLVLHNREHLMAQMPMRICHPPMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHEK RYPKADVLLMGQMRALIEECYWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHLLRAEPDDVLMLDLE EEF >Mature_482_residues PARFSQQNQRVRPNSNEDKVVARAKEHFEKTLIQISGDIAGSVAALEHPTKNDALNYGEIFLRDNVPVMIYLLTQKRYDI VKKFLTVSLDLQSTTYQTRGVFPTSFVEEKGKLIADYGQRSIGRITSADASLWWPVLCWLYVRKSGDQSFGTSQQVQRGV QLLLDLVLHPTFEGNPVLFVPDCSFMIDRPMDVWGAPLEVEVLLHASLKSCIQLMELSRKHQKSRLLDQRLVLTRQWVHD LRQFLLKHYWVTSKTMQVLRRRPTEQYGEDQHQNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLAC MFGVLTAPQQRALFRLVLHNREHLMAQMPMRICHPPMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHEKR YPKADVLLMGQMRALIEECYWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHLLRAEPDDVLMLDLEE EF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56357; Mature: 56226
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARFSQQNQRVRPNSNEDKVVARAKEHFEKTLIQISGDIAGSVAALEHPTKNDALNYGE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCE IFLRDNVPVMIYLLTQKRYDIVKKFLTVSLDLQSTTYQTRGVFPTSFVEEKGKLIADYGQ EEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCHHCCCCCHHHHHHCCCEEHHHCC RSIGRITSADASLWWPVLCWLYVRKSGDQSFGTSQQVQRGVQLLLDLVLHPTFEGNPVLF HHHCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCSFMIDRPMDVWGAPLEVEVLLHASLKSCIQLMELSRKHQKSRLLDQRLVLTRQWVH ECCCHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGEDQHQNEFNVQPQVVPSWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLTAPQQRALFRLVLHNREHLMAQMPMRICHPPMDV EEEECCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCHHHCCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHEKRYPKADVLLMGQMRALIEEC HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHH YWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHLLRAEPDDVLMLDLE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC EEF CCC >Mature Secondary Structure PARFSQQNQRVRPNSNEDKVVARAKEHFEKTLIQISGDIAGSVAALEHPTKNDALNYGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCE IFLRDNVPVMIYLLTQKRYDIVKKFLTVSLDLQSTTYQTRGVFPTSFVEEKGKLIADYGQ EEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCHHCCCCCHHHHHHCCCEEHHHCC RSIGRITSADASLWWPVLCWLYVRKSGDQSFGTSQQVQRGVQLLLDLVLHPTFEGNPVLF HHHCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCSFMIDRPMDVWGAPLEVEVLLHASLKSCIQLMELSRKHQKSRLLDQRLVLTRQWVH ECCCHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGEDQHQNEFNVQPQVVPSWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLTAPQQRALFRLVLHNREHLMAQMPMRICHPPMDV EEEECCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCHHHCCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHEKRYPKADVLLMGQMRALIEEC HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHH YWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMHHLLRAEPDDVLMLDLE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC EEF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA