| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025114
Identifier: 124025114
GI number: 124025114
Start: 370525
End: 371313
Strand: Reverse
Name: 124025114
Synonym: NATL1_04011
Alternate gene names: NA
Gene position: 371313-370525 (Counterclockwise)
Preceding gene: 124025115
Following gene: 124025113
Centisome position: 19.91
GC content: 30.04
Gene sequence:
>789_bases ATGGCAGAACTATTAATAAAAAATAGCTCTGTTGGTTTTATTAAGGCAGTAATATTTGATAAGGATGGGACCTTATCAAA TAGTGAGGAGTGCTTATTAGAACTGGCTAAAACTAGGATAAATTTTTTTGAAGATAAACTTAAAAAATTAAAATTAAACA CTATTAAAATTTGGTTATTAAAAAAATTACTTATTTCTGTTTATGGATTAAAGAAAAATTCTCTTTCAGCTAATGCCAGT TTAGCTATAGCTTCTAGAGAGCAAAACATTATATCAACTGCGACAATCTTTACTTTATTTGGTTTCGATTGGTTTCAATC ACTTTCAATAGGTAAAGAAATCTTCGATGAAGTAGATATTTACCTTTTTAATCAAAAAGGTAATGCGCAGAAGCATAGAA CTCTAATTTCAGGAGCTTTAGATCTATTGGTTTCTCTAAAAAAAGAGGGAGTATCTCTTGCATTAATGACAAATGATACA CAAGTAGGGATTGAAGAATTTATTTGCAGGAATAAATTGGAAGGTATATTTGATTATCATTGGAGTGCTGAAAATAAACC TTCTAAGCCCAATCCAGAAGCAGTTATAGAACTTTGCAAAAAAATGAACTTTAACCCTTCAGATTGTGCTCTTATTTCAG ATGCAGATACTGATTTAAGAATGGCGAAAGAAGCTGGTATAACATTAGTAGTTGGTTTTAATGGTGGCTGGCAAACCCCC CCAGTTCTGACTGAAAAAAAATTTCTTATAGAAAAATTAAATGAATTAAAAATTCATTCAAGCTATTAA
Upstream 100 bases:
>100_bases AGAGATGGCAGCAAGATACAAACAAATGCTTCTTGAGCAAGCAGAAGAAGGAGAAGATCCTATTGCAGTAATGACTATTT GATTATTTATATTTATTGAA
Downstream 100 bases:
>100_bases AATATTGAATATTAATATTTTAAATGAGTAGATACGTTTTCACATCTGAATCTGTCACTGAAGGACATCCAGACAAAATC TGTGATCAAGTGAGTGACGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD Superfamily Phosphatase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Phosphatase; Haloacid Dehalogenase/Epoxide Hydrolase Family
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MAELLIKNSSVGFIKAVIFDKDGTLSNSEECLLELAKTRINFFEDKLKKLKLNTIKIWLLKKLLISVYGLKKNSLSANAS LAIASREQNIISTATIFTLFGFDWFQSLSIGKEIFDEVDIYLFNQKGNAQKHRTLISGALDLLVSLKKEGVSLALMTNDT QVGIEEFICRNKLEGIFDYHWSAENKPSKPNPEAVIELCKKMNFNPSDCALISDADTDLRMAKEAGITLVVGFNGGWQTP PVLTEKKFLIEKLNELKIHSSY
Sequences:
>Translated_262_residues MAELLIKNSSVGFIKAVIFDKDGTLSNSEECLLELAKTRINFFEDKLKKLKLNTIKIWLLKKLLISVYGLKKNSLSANAS LAIASREQNIISTATIFTLFGFDWFQSLSIGKEIFDEVDIYLFNQKGNAQKHRTLISGALDLLVSLKKEGVSLALMTNDT QVGIEEFICRNKLEGIFDYHWSAENKPSKPNPEAVIELCKKMNFNPSDCALISDADTDLRMAKEAGITLVVGFNGGWQTP PVLTEKKFLIEKLNELKIHSSY >Mature_261_residues AELLIKNSSVGFIKAVIFDKDGTLSNSEECLLELAKTRINFFEDKLKKLKLNTIKIWLLKKLLISVYGLKKNSLSANASL AIASREQNIISTATIFTLFGFDWFQSLSIGKEIFDEVDIYLFNQKGNAQKHRTLISGALDLLVSLKKEGVSLALMTNDTQ VGIEEFICRNKLEGIFDYHWSAENKPSKPNPEAVIELCKKMNFNPSDCALISDADTDLRMAKEAGITLVVGFNGGWQTPP VLTEKKFLIEKLNELKIHSSY
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29386; Mature: 29255
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELLIKNSSVGFIKAVIFDKDGTLSNSEECLLELAKTRINFFEDKLKKLKLNTIKIWLL CCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLLISVYGLKKNSLSANASLAIASREQNIISTATIFTLFGFDWFQSLSIGKEIFDEVDI HHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE YLFNQKGNAQKHRTLISGALDLLVSLKKEGVSLALMTNDTQVGIEEFICRNKLEGIFDYH EEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCHHHEEC WSAENKPSKPNPEAVIELCKKMNFNPSDCALISDADTDLRMAKEAGITLVVGFNGGWQTP CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCEEEEEECCCCCCCC PVLTEKKFLIEKLNELKIHSSY CCCCHHHHHHHHHHHCEEECCC >Mature Secondary Structure AELLIKNSSVGFIKAVIFDKDGTLSNSEECLLELAKTRINFFEDKLKKLKLNTIKIWLL CCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLLISVYGLKKNSLSANASLAIASREQNIISTATIFTLFGFDWFQSLSIGKEIFDEVDI HHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE YLFNQKGNAQKHRTLISGALDLLVSLKKEGVSLALMTNDTQVGIEEFICRNKLEGIFDYH EEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCHHHEEC WSAENKPSKPNPEAVIELCKKMNFNPSDCALISDADTDLRMAKEAGITLVVGFNGGWQTP CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCEEEEEECCCCCCCC PVLTEKKFLIEKLNELKIHSSY CCCCHHHHHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA