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The map label for this gene is cca [H]

Identifier: 124025095

GI number: 124025095

Start: 352820

End: 354076

Strand: Reverse

Name: cca [H]

Synonym: NATL1_03821

Alternate gene names: 124025095

Gene position: 354076-352820 (Counterclockwise)

Preceding gene: 124025096

Following gene: 124025093

Centisome position: 18.99

GC content: 28.88

Gene sequence:

>1257_bases
ATGGAATTATTTGATAAATCTACAATTGAAAAAGAGATAAAAGAATTACCGAGTGGAATTCTAACTATTATTTTAGAAGC
AGCTTGCTCAGTCAATATAACTTCTATTGCAATAGTTGGAGGAGTTGTAAGAGACTTAATAAAAAAATCTAAAAATCAAG
ATTATGAAATTATCTTCAATGATCTAGATTTAATTATTGAAGGTGAGACCTCAACCTATATCAAAGAATTGCAAAAAGTT
CTTGGAGCAGAAAGAGTAAAAGTCATACGAGATAACAGAAATTACAAAACCTCAGAAGTGATAATTAATGGCATAAAAGT
TGATATTGCATCTGCTCGTAAAGAAACGTATCCAATACCTGGAGAAAACCCAATAGTCGAATTATCAACAATCAAAAAAG
ATCTAATAAGAAGAGATTTTAATATAAATGCAATGGCAATTGAACTGAAAGATAATAGACTAATCGATTTATTTTCAGGA
TCAGATGCAATTGAAAATATGAAAATGGACTTTTTGCATAAATCAAGTGTTTTAGATGACCCAACTAGAGTTATTAGAGC
TTCTCGCTATTCTGCTAAGTTAGATTTTGATCTATCAAATCAAGCCTTAAAACAAATAAAAGATACAATAAATCTTTGGC
CTTGGAATTGGCATATTGGAGATAATACTGATTTAGCACCTTCAGCATTATCAATAAGATTAAAAATGGAACTAGAATTG
CTTTTAGAAGACAAATATTGGAAGAATGCATTAAAAAATCTACAAGTCTGTGGAGGGCTAAAAATAGTAGATTCGAAATT
ACAAAATGATCAACGACTTATTGAAAAAATTTTTATTGCAAAGAAATCTAATATTGAACCCCTAACAGCATTTGTTTATG
AATCTAAAAGCCCTATTTATCTAGCTAAGAGATTACACTTAAATCAACAGCAAAAAGAAATAATAGAAGGAGCTTGTAGA
TTAAATAAATATCTAAAAAATTTAACAGCTAATCATTTATATAAAAATTGGTCACCATCCAAGTGGACAACAAACCTTGA
GAAAATCAATGCTAATGAATCTTCTTTCATGCTTGAAATATGTAGAAATAACCCACTAAAAGAATATTTGAAATCTTGGC
TATTTAATTGGAAGAATATAGAGTCTCCAATAAAAGGAGATGATTTAATAGCTAAAGGTTGGGAACCTGGACCAGAAATA
GGAATAGAAATAAAACGGCAAAGAATGAAATTAATTGATGAAAATATTGCTTTTTAA

Upstream 100 bases:

>100_bases
ATGGGGCCAAAAATATTAGACCCAAGACTAGCTCCATTGAAATTGATAGATGAGTAAGATTTAATCTGAAAAATGTTAAC
TAGCTAAAACCATATTTCTC

Downstream 100 bases:

>100_bases
AAATCTAATAAGTATTTATTTAGAAATAAAACCTATTTTAATCCAAGGTCCTTGCTGTATAAGTTTTTCTGAATAAATCG
ATGAACAACAAACAACCAAA

Product: tRNA nucleotidyltransferase/poly(A) polymerase

Products: NA

Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MELFDKSTIEKEIKELPSGILTIILEAACSVNITSIAIVGGVVRDLIKKSKNQDYEIIFNDLDLIIEGETSTYIKELQKV
LGAERVKVIRDNRNYKTSEVIINGIKVDIASARKETYPIPGENPIVELSTIKKDLIRRDFNINAMAIELKDNRLIDLFSG
SDAIENMKMDFLHKSSVLDDPTRVIRASRYSAKLDFDLSNQALKQIKDTINLWPWNWHIGDNTDLAPSALSIRLKMELEL
LLEDKYWKNALKNLQVCGGLKIVDSKLQNDQRLIEKIFIAKKSNIEPLTAFVYESKSPIYLAKRLHLNQQQKEIIEGACR
LNKYLKNLTANHLYKNWSPSKWTTNLEKINANESSFMLEICRNNPLKEYLKSWLFNWKNIESPIKGDDLIAKGWEPGPEI
GIEIKRQRMKLIDENIAF

Sequences:

>Translated_418_residues
MELFDKSTIEKEIKELPSGILTIILEAACSVNITSIAIVGGVVRDLIKKSKNQDYEIIFNDLDLIIEGETSTYIKELQKV
LGAERVKVIRDNRNYKTSEVIINGIKVDIASARKETYPIPGENPIVELSTIKKDLIRRDFNINAMAIELKDNRLIDLFSG
SDAIENMKMDFLHKSSVLDDPTRVIRASRYSAKLDFDLSNQALKQIKDTINLWPWNWHIGDNTDLAPSALSIRLKMELEL
LLEDKYWKNALKNLQVCGGLKIVDSKLQNDQRLIEKIFIAKKSNIEPLTAFVYESKSPIYLAKRLHLNQQQKEIIEGACR
LNKYLKNLTANHLYKNWSPSKWTTNLEKINANESSFMLEICRNNPLKEYLKSWLFNWKNIESPIKGDDLIAKGWEPGPEI
GIEIKRQRMKLIDENIAF
>Mature_418_residues
MELFDKSTIEKEIKELPSGILTIILEAACSVNITSIAIVGGVVRDLIKKSKNQDYEIIFNDLDLIIEGETSTYIKELQKV
LGAERVKVIRDNRNYKTSEVIINGIKVDIASARKETYPIPGENPIVELSTIKKDLIRRDFNINAMAIELKDNRLIDLFSG
SDAIENMKMDFLHKSSVLDDPTRVIRASRYSAKLDFDLSNQALKQIKDTINLWPWNWHIGDNTDLAPSALSIRLKMELEL
LLEDKYWKNALKNLQVCGGLKIVDSKLQNDQRLIEKIFIAKKSNIEPLTAFVYESKSPIYLAKRLHLNQQQKEIIEGACR
LNKYLKNLTANHLYKNWSPSKWTTNLEKINANESSFMLEICRNNPLKEYLKSWLFNWKNIESPIKGDDLIAKGWEPGPEI
GIEIKRQRMKLIDENIAF

Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing

COG id: COG0617

COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023068
- InterPro:   IPR002646 [H]

Pfam domain/function: PF01743 PolyA_pol [H]

EC number: =2.7.7.21; =2.7.7.25 [H]

Molecular weight: Translated: 48078; Mature: 48078

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFDKSTIEKEIKELPSGILTIILEAACSVNITSIAIVGGVVRDLIKKSKNQDYEIIFN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DLDLIIEGETSTYIKELQKVLGAERVKVIRDNRNYKTSEVIINGIKVDIASARKETYPIP
CEEEEEECCHHHHHHHHHHHHCHHHEEHEECCCCCCHHHHEEEEEEEEEEHHCCCCCCCC
GENPIVELSTIKKDLIRRDFNINAMAIELKDNRLIDLFSGSDAIENMKMDFLHKSSVLDD
CCCCEEEHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
PTRVIRASRYSAKLDFDLSNQALKQIKDTINLWPWNWHIGDNTDLAPSALSIRLKMELEL
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEEEEE
LLEDKYWKNALKNLQVCGGLKIVDSKLQNDQRLIEKIFIAKKSNIEPLTAFVYESKSPIY
ECCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEEECCCCCEE
LAKRLHLNQQQKEIIEGACRLNKYLKNLTANHLYKNWSPSKWTTNLEKINANESSFMLEI
EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHH
CRNNPLKEYLKSWLFNWKNIESPIKGDDLIAKGWEPGPEIGIEIKRQRMKLIDENIAF
HCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELFDKSTIEKEIKELPSGILTIILEAACSVNITSIAIVGGVVRDLIKKSKNQDYEIIFN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DLDLIIEGETSTYIKELQKVLGAERVKVIRDNRNYKTSEVIINGIKVDIASARKETYPIP
CEEEEEECCHHHHHHHHHHHHCHHHEEHEECCCCCCHHHHEEEEEEEEEEHHCCCCCCCC
GENPIVELSTIKKDLIRRDFNINAMAIELKDNRLIDLFSGSDAIENMKMDFLHKSSVLDD
CCCCEEEHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
PTRVIRASRYSAKLDFDLSNQALKQIKDTINLWPWNWHIGDNTDLAPSALSIRLKMELEL
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEEEEE
LLEDKYWKNALKNLQVCGGLKIVDSKLQNDQRLIEKIFIAKKSNIEPLTAFVYESKSPIY
ECCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEEECCCCCEE
LAKRLHLNQQQKEIIEGACRLNKYLKNLTANHLYKNWSPSKWTTNLEKINANESSFMLEI
EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHH
CRNNPLKEYLKSWLFNWKNIESPIKGDDLIAKGWEPGPEIGIEIKRQRMKLIDENIAF
HCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA