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The map label for this gene is yrbE [H]

Identifier: 124025066

GI number: 124025066

Start: 325178

End: 326200

Strand: Reverse

Name: yrbE [H]

Synonym: NATL1_03531

Alternate gene names: 124025066

Gene position: 326200-325178 (Counterclockwise)

Preceding gene: 124025067

Following gene: 124025065

Centisome position: 17.49

GC content: 37.15

Gene sequence:

>1023_bases
ATGAAAAAAATTTCCAAGATCAACGAAAATATTATTCCTGTAAAAGTTGGCGTAATAGGAATTGGGAATATGGGGTGGCA
TCATGCGAGAGTACTTAGTCTTCTCAAAGATGCTGAGCTAATTGGAGTTGCGGATTTAGACGAAGAACGAGGAAAGTTGG
CTATGGAGCAATTTAATTGTAATTGGTATGGAAACTATAAGGATTTATTACATCAAGTAGAAGCTGTATGTATTGCTGTA
CCTACGTTATTTCACCATGAAGTTGGTCTAGAATGTCTAAAGTCTGGTAAACATGTTTTAATTGAAAAACCGATAGCAGC
AAATAAAGAAGAAGCATCATCTTTGATCAATGCTTCAAACAATGCAAAAAAATTATTACAAGTTGGTCATATAGAAAGAT
TTAATCCTGCATTTAGAGAATTGACAAAAGTAGTTGCGAATGAAGAAGTTGTAGTTCTTGAAGCAAGAAGGCATAGTCCT
CATCCCGAGAGAGCTAATGATGTATCGGTCGTTTTAGACTTAATGATTCATGATATTGATTTAGTTATTGAACTAGCAAA
TTCAAAAGTAATAAGGCTTGCTGCCGTTGGAGGATGCAGTGGAGACGGACCTATGGATTACGTTAACGCAACACTGGGTT
TTCAAAACGGGGTGGTTGCAAGTTTGACTGCAAGCAAAATGAGTCACAAAAAAATCAGAAGTTTGAGCGCTCATTGCAAA
GAAAGTCTTATTGAAACAGATTTCCTAAATCACAATATTCACATCCATAGGAAGGCTCATGAATGGTATTCAGCTGATCA
TGGAGAATTACTTTATAGAAACGATGGTTTTATTGAAGAAGTGAGTACAACATCAATTGAGCCGTTGTATGCAGAACTGG
AGCATTTTCTACAATGCGTCAGAGGGAAGGAGAAGCCAGCTGTAGACGGTCTTCAAGCTTCTAGAGCACTTCATCTGGCT
GATTTAATTGAAAAGGCAGTATCAATACCAAGTGAAGACATTTTGCTAAGCAAAGGGATCTAG

Upstream 100 bases:

>100_bases
TTTGAAATTATCTCCATGAAAGGTCCAAGAATCAACAAAGTAAAAATAATCCTTCCTAAGTAATTTATAAAACAGACTAT
TAATTAATAAGAAAGTAAAC

Downstream 100 bases:

>100_bases
ATAAGCCTGATTAATTCACTCAAAAAAATAAAATATTTGCCCGATGTCTTACTTCGAACAAAAATTTTATTTTGTTAAGA
ATATCTAATCGATTAGTTAA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKKISKINENIIPVKVGVIGIGNMGWHHARVLSLLKDAELIGVADLDEERGKLAMEQFNCNWYGNYKDLLHQVEAVCIAV
PTLFHHEVGLECLKSGKHVLIEKPIAANKEEASSLINASNNAKKLLQVGHIERFNPAFRELTKVVANEEVVVLEARRHSP
HPERANDVSVVLDLMIHDIDLVIELANSKVIRLAAVGGCSGDGPMDYVNATLGFQNGVVASLTASKMSHKKIRSLSAHCK
ESLIETDFLNHNIHIHRKAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCVRGKEKPAVDGLQASRALHLA
DLIEKAVSIPSEDILLSKGI

Sequences:

>Translated_340_residues
MKKISKINENIIPVKVGVIGIGNMGWHHARVLSLLKDAELIGVADLDEERGKLAMEQFNCNWYGNYKDLLHQVEAVCIAV
PTLFHHEVGLECLKSGKHVLIEKPIAANKEEASSLINASNNAKKLLQVGHIERFNPAFRELTKVVANEEVVVLEARRHSP
HPERANDVSVVLDLMIHDIDLVIELANSKVIRLAAVGGCSGDGPMDYVNATLGFQNGVVASLTASKMSHKKIRSLSAHCK
ESLIETDFLNHNIHIHRKAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCVRGKEKPAVDGLQASRALHLA
DLIEKAVSIPSEDILLSKGI
>Mature_340_residues
MKKISKINENIIPVKVGVIGIGNMGWHHARVLSLLKDAELIGVADLDEERGKLAMEQFNCNWYGNYKDLLHQVEAVCIAV
PTLFHHEVGLECLKSGKHVLIEKPIAANKEEASSLINASNNAKKLLQVGHIERFNPAFRELTKVVANEEVVVLEARRHSP
HPERANDVSVVLDLMIHDIDLVIELANSKVIRLAAVGGCSGDGPMDYVNATLGFQNGVVASLTASKMSHKKIRSLSAHCK
ESLIETDFLNHNIHIHRKAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCVRGKEKPAVDGLQASRALHLA
DLIEKAVSIPSEDILLSKGI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Drosophila melanogaster, GI24581117, Length=212, Percent_Identity=26.4150943396226, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 37633; Mature: 37633

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISKINENIIPVKVGVIGIGNMGWHHARVLSLLKDAELIGVADLDEERGKLAMEQFNC
CCCHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHCCEEHHHCCC
NWYGNYKDLLHQVEAVCIAVPTLFHHEVGLECLKSGKHVLIEKPIAANKEEASSLINASN
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCC
NAKKLLQVGHIERFNPAFRELTKVVANEEVVVLEARRHSPHPERANDVSVVLDLMIHDID
CHHHHHHHHCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LVIELANSKVIRLAAVGGCSGDGPMDYVNATLGFQNGVVASLTASKMSHKKIRSLSAHCK
HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ESLIETDFLNHNIHIHRKAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCV
HHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH
RGKEKPAVDGLQASRALHLADLIEKAVSIPSEDILLSKGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
>Mature Secondary Structure
MKKISKINENIIPVKVGVIGIGNMGWHHARVLSLLKDAELIGVADLDEERGKLAMEQFNC
CCCHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHCCEEHHHCCC
NWYGNYKDLLHQVEAVCIAVPTLFHHEVGLECLKSGKHVLIEKPIAANKEEASSLINASN
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCC
NAKKLLQVGHIERFNPAFRELTKVVANEEVVVLEARRHSPHPERANDVSVVLDLMIHDID
CHHHHHHHHCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LVIELANSKVIRLAAVGGCSGDGPMDYVNATLGFQNGVVASLTASKMSHKKIRSLSAHCK
HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ESLIETDFLNHNIHIHRKAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCV
HHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH
RGKEKPAVDGLQASRALHLADLIEKAVSIPSEDILLSKGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]