Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124023108
Identifier: 124023108
GI number: 124023108
Start: 1198296
End: 1198811
Strand: Reverse
Name: 124023108
Synonym: P9303_14031
Alternate gene names: NA
Gene position: 1198811-1198296 (Counterclockwise)
Preceding gene: 124023113
Following gene: 124023104
Centisome position: 44.69
GC content: 49.81
Gene sequence:
>516_bases ATGACAAATCAGCCAAGGCCCCCTCTTTGCTGGCCGAAATCATTGGAGTCAAAGGTTTTCAGGTTCATCACTGCAGGACT GATCAGCGCTGGAAGTCTGCTGAACCAAACCGGTGCCGAAGCAGTACCAGATGGCATTGAGTATTACGGCCAGCGCATGG AGGCCATGTTCTTACGATTGGACCTCAACGGCGATGGTCGGCTGGATGCAAGCGAGGTTGGAGAAAAGACTTATCTGATA AGAAGGCTGAATAGAAAGAATTCACGTGGTTATTTAATTTTAGAGGACTTGCGACCTCCCGGCACTCATCCAAACGGTAA ACGGCTCCAACGACGTTTCAAGCAAGCCGATATCGACGGCGATGGGAAACTCAATCGCCATGAAGCTCAGTCAATCCGCT GGCTGACCAACAACTTCAACAGACTGGATTTAAACAACGATAGCGATATAACGATGGAGGAGCTTTGGATGCTGCAAAGA TCCCTGGCGCCTCATCCTCATCCTCGCAAGCACTAA
Upstream 100 bases:
>100_bases TATCGCTTTTTCTACAGGGGTTGGAGCATGTCACAGCTCAAAGAGCTTTGGTCATAGTTCAGTCATCGACATTGCTGGAC ACGATCCATAGGCTGATTGC
Downstream 100 bases:
>100_bases CGACGGATCTGGCGACGGATTGGCCTTCTGGAAACCTTCTTCGGCCTACTCCATAGTTGTGTAAAAAACCTCAACATCCG CCAGCTGCCACCAAGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTNQPRPPLCWPKSLESKVFRFITAGLISAGSLLNQTGAEAVPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVGEKTYLI RRLNRKNSRGYLILEDLRPPGTHPNGKRLQRRFKQADIDGDGKLNRHEAQSIRWLTNNFNRLDLNNDSDITMEELWMLQR SLAPHPHPRKH
Sequences:
>Translated_171_residues MTNQPRPPLCWPKSLESKVFRFITAGLISAGSLLNQTGAEAVPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVGEKTYLI RRLNRKNSRGYLILEDLRPPGTHPNGKRLQRRFKQADIDGDGKLNRHEAQSIRWLTNNFNRLDLNNDSDITMEELWMLQR SLAPHPHPRKH >Mature_170_residues TNQPRPPLCWPKSLESKVFRFITAGLISAGSLLNQTGAEAVPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVGEKTYLIR RLNRKNSRGYLILEDLRPPGTHPNGKRLQRRFKQADIDGDGKLNRHEAQSIRWLTNNFNRLDLNNDSDITMEELWMLQRS LAPHPHPRKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19704; Mature: 19573
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQPRPPLCWPKSLESKVFRFITAGLISAGSLLNQTGAEAVPDGIEYYGQRMEAMFLRL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEE DLNGDGRLDASEVGEKTYLIRRLNRKNSRGYLILEDLRPPGTHPNGKRLQRRFKQADIDG ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCC DGKLNRHEAQSIRWLTNNFNRLDLNNDSDITMEELWMLQRSLAPHPHPRKH CCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNQPRPPLCWPKSLESKVFRFITAGLISAGSLLNQTGAEAVPDGIEYYGQRMEAMFLRL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEE DLNGDGRLDASEVGEKTYLIRRLNRKNSRGYLILEDLRPPGTHPNGKRLQRRFKQADIDG ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCC DGKLNRHEAQSIRWLTNNFNRLDLNNDSDITMEELWMLQRSLAPHPHPRKH CCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA