Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022743
Identifier: 124022743
GI number: 124022743
Start: 940503
End: 940973
Strand: Reverse
Name: 124022743
Synonym: P9303_10361
Alternate gene names: NA
Gene position: 940973-940503 (Counterclockwise)
Preceding gene: 124022744
Following gene: 124022741
Centisome position: 35.08
GC content: 53.5
Gene sequence:
>471_bases ATGAGCCTTGAAATTGTTGCTGAGTACCCACGTCCGCCAGCTCTTGTGGCCTGCTCAGACCACGTGATTGTGGAGGCCCT CGGTACGCGTATCTGTGAAACACATGACTGCCTGCGTGTGCTGGAGACATTCCATCCGCCCACCTACTATCTTCCTCCAA AGGCAATGCGGAAGGATCTACTGATACGCAGCCATCGCAGCAGTTTCTGCGAATGGAAGGGAATCGCCAACTACTGGGAT CTGGTGATTGCAGACAAACGTCTCGAGGGCGCAATCTGGTCGTATCCAGATCCCACCCCAACATTTAGGGCCCTTACGGG CTGGTATGCGCTATACCCCGGACGCATGGATCATTGCAGCGTCAATGGAGAGACAGTTATCCCCCAACCCGGACAGTTCT ATGGAGGATGGATCACATCGCAAGTGGTCGGTCCATTCAAAGGTGATCCTGCACATCCTGAGTTAATTTGA
Upstream 100 bases:
>100_bases TGTGTCAAAGGCCAGTACACAACATCTCTGGCATGTGCGACCAGGCTCAAATGTCATCACCCACCCCCTGAAACAAAGTC ACTTTCTCAACGGAGAGCTA
Downstream 100 bases:
>100_bases TCCATGAGAGCACCTCAAAAGAAATCGAGGCTGAGTGCAATCATGGTGACTCTGCATCAAAGTCAGCAGCGACTACTCCC TAGGCATTGATAGTGATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSLEIVAEYPRPPALVACSDHVIVEALGTRICETHDCLRVLETFHPPTYYLPPKAMRKDLLIRSHRSSFCEWKGIANYWD LVIADKRLEGAIWSYPDPTPTFRALTGWYALYPGRMDHCSVNGETVIPQPGQFYGGWITSQVVGPFKGDPAHPELI
Sequences:
>Translated_156_residues MSLEIVAEYPRPPALVACSDHVIVEALGTRICETHDCLRVLETFHPPTYYLPPKAMRKDLLIRSHRSSFCEWKGIANYWD LVIADKRLEGAIWSYPDPTPTFRALTGWYALYPGRMDHCSVNGETVIPQPGQFYGGWITSQVVGPFKGDPAHPELI >Mature_155_residues SLEIVAEYPRPPALVACSDHVIVEALGTRICETHDCLRVLETFHPPTYYLPPKAMRKDLLIRSHRSSFCEWKGIANYWDL VIADKRLEGAIWSYPDPTPTFRALTGWYALYPGRMDHCSVNGETVIPQPGQFYGGWITSQVVGPFKGDPAHPELI
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17628; Mature: 17497
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEIVAEYPRPPALVACSDHVIVEALGTRICETHDCLRVLETFHPPTYYLPPKAMRKDL CCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHH LIRSHRSSFCEWKGIANYWDLVIADKRLEGAIWSYPDPTPTFRALTGWYALYPGRMDHCS HHHHHHCCHHHHCCCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCEEC VNGETVIPQPGQFYGGWITSQVVGPFKGDPAHPELI CCCCEECCCCCCCCCCEEHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SLEIVAEYPRPPALVACSDHVIVEALGTRICETHDCLRVLETFHPPTYYLPPKAMRKDL CCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHH LIRSHRSSFCEWKGIANYWDLVIADKRLEGAIWSYPDPTPTFRALTGWYALYPGRMDHCS HHHHHHCCHHHHCCCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCEEC VNGETVIPQPGQFYGGWITSQVVGPFKGDPAHPELI CCCCEECCCCCCCCCCEEHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA