Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022741
Identifier: 124022741
GI number: 124022741
Start: 939595
End: 939993
Strand: Reverse
Name: 124022741
Synonym: P9303_10341
Alternate gene names: NA
Gene position: 939993-939595 (Counterclockwise)
Preceding gene: 124022743
Following gene: 124022740
Centisome position: 35.04
GC content: 42.11
Gene sequence:
>399_bases ATGAAACGTCTAGCATACAGTCTGCTTCCTTGCATTTTGATAACGCTCATCACCATTCACAGTCATCCCGCCATGGCTTT CACGATGGAAGGAGGTTTATCCGAATGCACAGTTGACACAAACTGTGTGCTTGTTGAATGGGAAGTCAACGAAGTGAAGC AGTCCTATGAGAATCTTTTAGGCATTGCTTCTCAACTACCAAGAACCAAAGTCCTCGAGCAAACCAACAATTATTGGCAT GCTGTCGTTAGAAGCTTAGTTTTTCGATTCCCAGATGACCTGGAGATTCTTCAAATACCAAACGAAAAAGTTGTCCAAGT TCGATCAGCTTCAAGAGTTGGTGTTTCAGATCTAGGCGTGAATAAGAAAAGAGTTGAAAGACTGTACAATCAACTGTAG
Upstream 100 bases:
>100_bases CTCATTGCTCCAATTGAGACATCAGACAAAGTTGTGTACTTAAAATACAGCTTGATAACAGCCTACAACCTGTAGGCTTC TCTTAAATGATTGCTTTTCA
Downstream 100 bases:
>100_bases GAATCGTTAAGAAAACTCGTAAATATAGCGCTCAGGCTTATAAAGAAGAGCAAAAGAAAAAATGCATAAGTCTCTAACAA ACAAAGCCTTTTCTACAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKRLAYSLLPCILITLITIHSHPAMAFTMEGGLSECTVDTNCVLVEWEVNEVKQSYENLLGIASQLPRTKVLEQTNNYWH AVVRSLVFRFPDDLEILQIPNEKVVQVRSASRVGVSDLGVNKKRVERLYNQL
Sequences:
>Translated_132_residues MKRLAYSLLPCILITLITIHSHPAMAFTMEGGLSECTVDTNCVLVEWEVNEVKQSYENLLGIASQLPRTKVLEQTNNYWH AVVRSLVFRFPDDLEILQIPNEKVVQVRSASRVGVSDLGVNKKRVERLYNQL >Mature_132_residues MKRLAYSLLPCILITLITIHSHPAMAFTMEGGLSECTVDTNCVLVEWEVNEVKQSYENLLGIASQLPRTKVLEQTNNYWH AVVRSLVFRFPDDLEILQIPNEKVVQVRSASRVGVSDLGVNKKRVERLYNQL
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15042; Mature: 15042
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLAYSLLPCILITLITIHSHPAMAFTMEGGLSECTVDTNCVLVEWEVNEVKQSYENLL CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCCEEEEEECHHHHHHHHHHHH GIASQLPRTKVLEQTNNYWHAVVRSLVFRFPDDLEILQIPNEKVVQVRSASRVGVSDLGV HHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCHHHCCC NKKRVERLYNQL CHHHHHHHHHCC >Mature Secondary Structure MKRLAYSLLPCILITLITIHSHPAMAFTMEGGLSECTVDTNCVLVEWEVNEVKQSYENLL CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCCEEEEEECHHHHHHHHHHHH GIASQLPRTKVLEQTNNYWHAVVRSLVFRFPDDLEILQIPNEKVVQVRSASRVGVSDLGV HHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCHHHCCC NKKRVERLYNQL CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA