Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022408
Identifier: 124022408
GI number: 124022408
Start: 652341
End: 652763
Strand: Direct
Name: 124022408
Synonym: P9303_06991
Alternate gene names: NA
Gene position: 652341-652763 (Clockwise)
Preceding gene: 124022406
Following gene: 124022410
Centisome position: 24.32
GC content: 50.83
Gene sequence:
>423_bases TTGACGTTCCAGGTAGCGATCTGCACAGGTCATGGAAATCTGACCATGACAATTAGCATTAGCCTTACTGAACTTGGGGA TGCGTCATTGATCAACCGAGCCCCCTTAGGTCTTATTCCCTTTTGCAAGCTTGGTTTGGCTGCACTGCCAATTGCCTTGC TCAGCCTGACAACAGTTGTCGATCCTGCTGAAGCACAGCTTTCAGGTGACTATCAGACACCTCAGGAGCGTGATCTTTAC AACACCGTTCCGGGGAACAACGACAAAGGAACGATTCTCGATGCCACCAATCCGATGGACCTTATGAATCGTTTGCGAAG GTCCACAGCAATGGACGATGCCACAGTTCCTTCTGATGCAATCGATGCAGCCCTCAAGGCCCTGGAATTGGAGAGTTCTG AGGCTTCGGCGAATCAGCCCTGA
Upstream 100 bases:
>100_bases GAACAGCGGATCATCCACTTTGGTCTCCTGGAGGCAAAGCAGATCGGGTTGGGCATCCTGTAGCCAAGCTTGCACCTGAT CGAGGCGGGTGCGAATTGAG
Downstream 100 bases:
>100_bases GGACACTGTTTGAACCTTTTGTGCGGATTGAGTTAAGCCTCCACTGACTCGCCAGGCCATCAATCAGGGGATCGGCTTCG CCTGGTTTTTTACGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTFQVAICTGHGNLTMTISISLTELGDASLINRAPLGLIPFCKLGLAALPIALLSLTTVVDPAEAQLSGDYQTPQERDLY NTVPGNNDKGTILDATNPMDLMNRLRRSTAMDDATVPSDAIDAALKALELESSEASANQP
Sequences:
>Translated_140_residues MTFQVAICTGHGNLTMTISISLTELGDASLINRAPLGLIPFCKLGLAALPIALLSLTTVVDPAEAQLSGDYQTPQERDLY NTVPGNNDKGTILDATNPMDLMNRLRRSTAMDDATVPSDAIDAALKALELESSEASANQP >Mature_139_residues TFQVAICTGHGNLTMTISISLTELGDASLINRAPLGLIPFCKLGLAALPIALLSLTTVVDPAEAQLSGDYQTPQERDLYN TVPGNNDKGTILDATNPMDLMNRLRRSTAMDDATVPSDAIDAALKALELESSEASANQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14786; Mature: 14655
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQVAICTGHGNLTMTISISLTELGDASLINRAPLGLIPFCKLGLAALPIALLSLTTVV CEEEEEEEECCCCEEEEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC DPAEAQLSGDYQTPQERDLYNTVPGNNDKGTILDATNPMDLMNRLRRSTAMDDATVPSDA CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHH IDAALKALELESSEASANQP HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TFQVAICTGHGNLTMTISISLTELGDASLINRAPLGLIPFCKLGLAALPIALLSLTTVV EEEEEEEECCCCEEEEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC DPAEAQLSGDYQTPQERDLYNTVPGNNDKGTILDATNPMDLMNRLRRSTAMDDATVPSDA CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHH IDAALKALELESSEASANQP HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA