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The map label for this gene is yebA [H]

Identifier: 124022335

GI number: 124022335

Start: 588094

End: 589065

Strand: Direct

Name: yebA [H]

Synonym: P9303_06251

Alternate gene names: 124022335

Gene position: 588094-589065 (Clockwise)

Preceding gene: 124022333

Following gene: 124022340

Centisome position: 21.92

GC content: 57.3

Gene sequence:

>972_bases
GTGCCGTTTCGCTGGTTCGCTGCTGCATGGCTGCTTTCAGTGCCTGTCCTTGCCAAGCCAATGGATCCTGTTGCTCAAGC
GGTTCGGCAATCACCTTTGTTGCCTGCGCGTGAGGCTAGTCAGCTTGAGCGGCCGCAAAGGTTTGATCAATCTCTTGAAG
AGCTGGAGCGCAACAAGGTGATCACTTCAGCGGAACGCCGACAGTTGGAGGGGCATGCGGTGGGTTTGACGATCGATGTG
CCTCGGATGCAGCAGGCCTGTCGTAGTGGTGCTCTGTCAGCTAAGGAATGTGCCAGTGGCGTTGCTCTTCGCTCCAGGGG
GCGTCGAGGTCGTTCCCAGTTCAGCTTGCTGCGCCGTGGCCCTGGCGGTCGGCTATTGCCGCCGCTTACGGTTCCGGTTT
CGGCATTGTTGGCAGGCTCTGAGAGTGGCTTCAGCTTGGCTTCAGTGTTTGCGGTGACTCCGAGGCCAAAGCCCCTGCGA
GGAAATGGAGATCGTCAGCTTCTTTTCCCGATCATTGGTGGGGCTTTTACCAGTAGTGAATTCGGCATGCGTTTGCATCC
TGTGATTGGCAGTTGGTTGATGCATGCGGGTAAAGACCTAGCCGCACCAGAAGGTGCTCCGGTGGTGGCTGCATTAACGG
GAACTGTTGTCAGTAGCGGCCTAGCTGGGGGCTATGGCATTGCTGTTGAACTGGAACATGATGCTCCTCGCAGGCGCACG
CTTTATGGGCATCTTTCAGAGATTTATCTGCGGCCGGGTCAGCGGGTTCGTCAAGGGGAGGTGATTGGTCGGGTTGGTAG
CACCGGCTTAAGCACTGGTCCACATCTCCATTTCGAATTGAGACGCCCTCAGGGTGGCGGTTGGGTTGCGATGGATCCCG
GTGAGTTGGATCTCAATCCACTCATGGCTTCAGGTGTCGACCCGGTTTCGCTGTTGGTCGGTCAGTTGATCGAGAGCCTC
GAACGGCCTTAA

Upstream 100 bases:

>100_bases
GCTTTTGCTGAGCCAGGGTTCTCGGACCATGCGCTGGACACGCTGGTGATAACTGAGTTGGACTTTTTCTATAGTTTTTC
TCGTCTGAGGATCCGATCGG

Downstream 100 bases:

>100_bases
TCAATGAATACCTTTCTTCGCGAAGGATAAAGAAATCTTTTGATCTCTCCCAATGGAAGAACTCTGAGTATTGAGAATAC
AATTTGCGTAAAACCCAACA

Product: M23/M37 familypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPFRWFAAAWLLSVPVLAKPMDPVAQAVRQSPLLPAREASQLERPQRFDQSLEELERNKVITSAERRQLEGHAVGLTIDV
PRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRGPGGRLLPPLTVPVSALLAGSESGFSLASVFAVTPRPKPLR
GNGDRQLLFPIIGGAFTSSEFGMRLHPVIGSWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNPLMASGVDPVSLLVGQLIESL
ERP

Sequences:

>Translated_323_residues
MPFRWFAAAWLLSVPVLAKPMDPVAQAVRQSPLLPAREASQLERPQRFDQSLEELERNKVITSAERRQLEGHAVGLTIDV
PRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRGPGGRLLPPLTVPVSALLAGSESGFSLASVFAVTPRPKPLR
GNGDRQLLFPIIGGAFTSSEFGMRLHPVIGSWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNPLMASGVDPVSLLVGQLIESL
ERP
>Mature_322_residues
PFRWFAAAWLLSVPVLAKPMDPVAQAVRQSPLLPAREASQLERPQRFDQSLEELERNKVITSAERRQLEGHAVGLTIDVP
RMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRGPGGRLLPPLTVPVSALLAGSESGFSLASVFAVTPRPKPLRG
NGDRQLLFPIIGGAFTSSEFGMRLHPVIGSWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRTL
YGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNPLMASGVDPVSLLVGQLIESLE
RP

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=139, Percent_Identity=37.410071942446, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34621; Mature: 34490

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFRWFAAAWLLSVPVLAKPMDPVAQAVRQSPLLPAREASQLERPQRFDQSLEELERNKV
CCCHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ITSAERRQLEGHAVGLTIDVPRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRG
HHHHHHHHCCCEEEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
PGGRLLPPLTVPVSALLAGSESGFSLASVFAVTPRPKPLRGNGDRQLLFPIIGGAFTSSE
CCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC
FGMRLHPVIGSWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
CCCEEHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEEECCCCCCHHH
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNP
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCH
LMASGVDPVSLLVGQLIESLERP
HHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PFRWFAAAWLLSVPVLAKPMDPVAQAVRQSPLLPAREASQLERPQRFDQSLEELERNKV
CCHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ITSAERRQLEGHAVGLTIDVPRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRG
HHHHHHHHCCCEEEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
PGGRLLPPLTVPVSALLAGSESGFSLASVFAVTPRPKPLRGNGDRQLLFPIIGGAFTSSE
CCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC
FGMRLHPVIGSWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
CCCEEHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEEECCCCCCHHH
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNP
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCH
LMASGVDPVSLLVGQLIESLERP
HHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]