Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is fabZ
Identifier: 124022261
GI number: 124022261
Start: 534823
End: 535230
Strand: Direct
Name: fabZ
Synonym: P9303_05511
Alternate gene names: 124022261
Gene position: 534823-535230 (Clockwise)
Preceding gene: 124022260
Following gene: 124022262
Centisome position: 19.94
GC content: 55.88
Gene sequence:
>408_bases ATGGGGCTGCTGCCTCATCGTTATCCGTTTGCTCTGGTTGATCGTGTTGTGCTCCATGAACCTGGCCAGCGGGCTGTTGC GATCAAAAATGTGACCCTCAATGAACCTCAGTTCCAGGGTCATTTCCCTGGTCGTCCTTTGATGCCTGGGGTCTTGATTG TTGAGGCGATGGCCCAGGTGGGTGGTTTGATCGTGGCCCAGATGCCAGATCTGCCCAAGGGGTTATTCGTGTTTGCAGGT ATCGATGCAGTTCGTTTCCGCCGTCCGGTGGTGCCAGGAGATCAGCTCACGATTAGCTGCGAGCTGCTTAGCTTGAAGCG GCAGCGCTTTGGCAAAGTCAGGGGGGAAGCCAGGGTGGAGGGCCAGCTGGTTTGCTCTGGTGAGTTGATGTTTTCCTTGG TGGACTGA
Upstream 100 bases:
>100_bases TCCACAACGATCTGGCGAATGCTCTCCTTGCCGTCTGTCCTGTGACTGTCTCTTGACCGATCCCTCTCCTAATACTGCAG TGTTGACAAGTGAGCAGATC
Downstream 100 bases:
>100_bases GGATCATGAGCGAGGTGGGCAAACTCTCAGCGATCACTGCCGAAAAAAAGGCTCAGGTTCACCCTGCGGCTGTGGTGGAT CCTCGTGCTGAGCTCGCTTC
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGLLPHRYPFALVDRVVLHEPGQRAVAIKNVTLNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVAQMPDLPKGLFVFAG IDAVRFRRPVVPGDQLTISCELLSLKRQRFGKVRGEARVEGQLVCSGELMFSLVD
Sequences:
>Translated_135_residues MGLLPHRYPFALVDRVVLHEPGQRAVAIKNVTLNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVAQMPDLPKGLFVFAG IDAVRFRRPVVPGDQLTISCELLSLKRQRFGKVRGEARVEGQLVCSGELMFSLVD >Mature_134_residues GLLPHRYPFALVDRVVLHEPGQRAVAIKNVTLNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVAQMPDLPKGLFVFAGI DAVRFRRPVVPGDQLTISCELLSLKRQRFGKVRGEARVEGQLVCSGELMFSLVD
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=130, Percent_Identity=50, Blast_Score=127, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_PROMM (Q7V5X4)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895238.1 - ProteinModelPortal: Q7V5X4 - SMR: Q7V5X4 - STRING: Q7V5X4 - GeneID: 1727912 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT1411 - NMPDR: fig|74547.1.peg.1405 - eggNOG: COG0764 - HOGENOM: HBG433282 - OMA: KERRGVA - ProtClustDB: PRK00006 - BioCyc: PMAR74547:PMT1411-MONOMER - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084 - TIGRFAMs: TIGR01750
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.-
Molecular weight: Translated: 14828; Mature: 14697
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: ACT_SITE 48-48
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLPHRYPFALVDRVVLHEPGQRAVAIKNVTLNEPQFQGHFPGRPLMPGVLIVEAMAQV CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH GGLIVAQMPDLPKGLFVFAGIDAVRFRRPVVPGDQLTISCELLSLKRQRFGKVRGEARVE CCEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEC GQLVCSGELMFSLVD EEEEECCCEEEEECC >Mature Secondary Structure GLLPHRYPFALVDRVVLHEPGQRAVAIKNVTLNEPQFQGHFPGRPLMPGVLIVEAMAQV CCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH GGLIVAQMPDLPKGLFVFAGIDAVRFRRPVVPGDQLTISCELLSLKRQRFGKVRGEARVE CCEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEC GQLVCSGELMFSLVD EEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642