Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is nadE [H]
Identifier: 124022199
GI number: 124022199
Start: 484294
End: 485988
Strand: Reverse
Name: nadE [H]
Synonym: P9303_04891
Alternate gene names: 124022199
Gene position: 485988-484294 (Counterclockwise)
Preceding gene: 124022200
Following gene: 124022198
Centisome position: 18.12
GC content: 57.17
Gene sequence:
>1695_bases ATGCGCCTTGCTCTAGCCCAGCTCAATCCACTTGTAGGCGATCTGGCTGGCAACGGCGAAAAGATTCTGGCTGCCTGCCG TGAGGCTGCTGATCTCGGTGCAGATCTGGTACTCACGCCTGAGCTTTCCCTGTGGGGATATCCACCCCGAGATCTGTTGC TTAGCCACAACCACCTCGTTCAACAAAGCGATGTGCTCAACCAGATGGCGAGCATCCTTGCCCACGAAGCCCCTGACCTG GCAGTGCTCGTTGGCCTAGCTGAGCAAGCCCATGACCCTCAACTGCCCCAGCTCTTCAATGCTCTAGCCCTGATCAAAAG CTCCCAATGGCAGGTGGTAGCTCGCAAGCAACTGCTACCCACCTATGACGTTTTCGATGAAAAACGCTATTTCCGCCCGG CAGGAACTCCGGCTGTCTTGGAGTTTGAACGCGATGGGCGTCGCTGGCGTCTTGGGCTCACAATCTGCGAAGACCTCTGG GTGGAAGAAGCACTACAGGGCAAGCGCATTGCCGGCCCTGACCCCATCGCAGCGCTGCTGCCACAAAACATCGACCTACT GCTTAATCTCTCGGCTTCGCCATTCAGCCAATCCAAAGAACTTCTGCGCCAGCGCCTGGCCGCTAGAGCTGCCCAGAGAC TGAGCGCTCCGGTGATCTATGTGAATCAAGTGGGCGGCAACGACGAGCTGGTCTTTGATGGCGCCAGTTTCGTCGTCGAT GAGCATGCTGAACTTGCCCTGCAATTGCCAAGTTGTCGCGAATCAGTAGCCATCTGGGATGCAACCTCTACAGCCACCCA TCTCGACGTCCCTACGATTGAACCACTAGAGAAGCTATTCCGGGCCTTGGTTCTAGGTGTGCGTGACTACGCCGGCAAAT GTGGCTTTAAGCGGGCATTGCTTGGCCTCAGCGGTGGTATCGATTCGGCTCTCGTGGCCGTGATCGCTGCAGCGGCCCTA GGTGCCGATCAGGTGACATCCCTACTGATGCCCTCACCCTGGAGTTCAGCCGGTTCAATTGATGACGCCCTAGCTCTAGC CAAACGTCTAGGGATGGCGACCCACACTGTGTCGATTGCGACCTTGATGACGAATTTTGAGGCTGCCCTCATCCCTCCTC TCGGCAAGCCACCCGAGGGCGTTACTGCAGAGAACCTCCAATCCCGCATCCGCGGCACCTTACTGATGGCATTGGCCAAC CAACAAGACCAGCTGCTGCTATCCACTGGCAACAAATCCGAACTAGCAGTGGGCTACTGCACCCTTTATGGCGATATGAA CGGCGGCCTAGCCGTGATTGGAGATGTCTACAAAACCAACGTCTTCCGCCTCTGTGATTGGCTTGACAGCCCTGCCGCCG AAACATGCCGCAAAGAGGTAGGACTACCAACGAAAGGCGAACTGATCGGTACGACAATCCGCCAAAAGCCTCCCAGCGCC GAATTGCGCCCGAACCAACGCGATAGCGATTCACTACCCGACTACGCCCTCCTCGACCCTCTGCTTAAAGCTCTGATTGA AGAACGCCTCAGTACGGAGCAACTTGTCAGCAGAGGACATAACCCTGCCCTAATTGGGAGGGTGCAGCAATTACTGCGAC GGGCCGAATTCAAACGGCGACAGGCCCCACCCCTGCTGAAGGTGAGTTCACAGGCCTTTGGCAGCGGCTGGCGGCTACCG ATCGCCGCCGAATAA
Upstream 100 bases:
>100_bases GTTCTGAGGTACGCAGTCAACCCAAGCCGGCCCAGATCCCTGCAGCATTGTGGCCATTAGTTCTGGAACACAACCTCTAC GGCCTCGCCACCAGTCCCTG
Downstream 100 bases:
>100_bases TCACCACAAAACCTGGTCAGGCTGCCCTGATGTCGCCAACCTAAAAGAAGTCATTGGCGTCCATGGACTCCTCTATTCTT TCGGCCCCAATAGCCAGCAT
Product: carbon-nitrogen hydrolase:NAD+ synthase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLVQQSDVLNQMASILAHEAPDL AVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLPTYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLW VEEALQGKRIAGPDPIAALLPQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD EHAELALQLPSCRESVAIWDATSTATHLDVPTIEPLEKLFRALVLGVRDYAGKCGFKRALLGLSGGIDSALVAVIAAAAL GADQVTSLLMPSPWSSAGSIDDALALAKRLGMATHTVSIATLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALAN QQDQLLLSTGNKSELAVGYCTLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGELIGTTIRQKPPSA ELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVSRGHNPALIGRVQQLLRRAEFKRRQAPPLLKVSSQAFGSGWRLP IAAE
Sequences:
>Translated_564_residues MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLVQQSDVLNQMASILAHEAPDL AVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLPTYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLW VEEALQGKRIAGPDPIAALLPQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD EHAELALQLPSCRESVAIWDATSTATHLDVPTIEPLEKLFRALVLGVRDYAGKCGFKRALLGLSGGIDSALVAVIAAAAL GADQVTSLLMPSPWSSAGSIDDALALAKRLGMATHTVSIATLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALAN QQDQLLLSTGNKSELAVGYCTLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGELIGTTIRQKPPSA ELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVSRGHNPALIGRVQQLLRRAEFKRRQAPPLLKVSSQAFGSGWRLP IAAE >Mature_564_residues MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLVQQSDVLNQMASILAHEAPDL AVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLPTYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLW VEEALQGKRIAGPDPIAALLPQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD EHAELALQLPSCRESVAIWDATSTATHLDVPTIEPLEKLFRALVLGVRDYAGKCGFKRALLGLSGGIDSALVAVIAAAAL GADQVTSLLMPSPWSSAGSIDDALALAKRLGMATHTVSIATLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALAN QQDQLLLSTGNKSELAVGYCTLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGELIGTTIRQKPPSA ELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVSRGHNPALIGRVQQLLRRAEFKRRQAPPLLKVSSQAFGSGWRLP IAAE
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 61043; Mature: 61043
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLV CCEEHHHHCHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHCCCHHHH QQSDVLNQMASILAHEAPDLAVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLP HHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC TYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLWVEEALQGKRIAGPDPIAALL CHHHHCCHHHCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHC PQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCHHEEC EHAELALQLPSCRESVAIWDATSTATHLDVPTIEPLEKLFRALVLGVRDYAGKCGFKRAL CCHHHEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH LGLSGGIDSALVAVIAAAALGADQVTSLLMPSPWSSAGSIDDALALAKRLGMATHTVSIA HHHCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH TLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALANQQDQLLLSTGNKSELAVGYC HHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEE TLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGELIGTTIRQKPPSA EEEECCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEECCHHHCCCCCC ELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVSRGHNPALIGRVQQLLRRAEFKRR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QAPPLLKVSSQAFGSGWRLPIAAE CCCCCEEECCHHCCCCCCCCCCCC >Mature Secondary Structure MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLV CCEEHHHHCHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHCCCHHHH QQSDVLNQMASILAHEAPDLAVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLP HHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC TYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLWVEEALQGKRIAGPDPIAALL CHHHHCCHHHCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHC PQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCHHEEC EHAELALQLPSCRESVAIWDATSTATHLDVPTIEPLEKLFRALVLGVRDYAGKCGFKRAL CCHHHEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH LGLSGGIDSALVAVIAAAALGADQVTSLLMPSPWSSAGSIDDALALAKRLGMATHTVSIA HHHCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH TLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALANQQDQLLLSTGNKSELAVGYC HHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEE TLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGELIGTTIRQKPPSA EEEECCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEECCHHHCCCCCC ELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVSRGHNPALIGRVQQLLRRAEFKRR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QAPPLLKVSSQAFGSGWRLPIAAE CCCCCEEECCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]