Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022168
Identifier: 124022168
GI number: 124022168
Start: 458758
End: 459456
Strand: Reverse
Name: 124022168
Synonym: P9303_04581
Alternate gene names: NA
Gene position: 459456-458758 (Counterclockwise)
Preceding gene: 124022169
Following gene: 124022167
Centisome position: 17.13
GC content: 58.51
Gene sequence:
>699_bases ATGCACGGATGGTGTGGCGATAGCAACACCTGGCAGCTCTGGGCCCGCCATTTTCAAGCCCATGGCTGGTTGTGGCAAAG CCAAGAACAGGGCTACGCAACACTGCCACCGCTTCAACCCCAATGGCATAACGCCCCTGAACCACCAGCAGAGCAAAGGC GGGTGGTGGTTGGCCATTCTTTAGGCCCACACCTGCTCGCCAGCGAAGTGCTTGCACAGGCCACCGATCTGGTGCTGCTG GCAAGCTTCGGGGGTTTCTTGCCCAAAGGACGAGCAAACCGTGCCCTACGCACTGGCCTAAAGGGCATGCAAGAACGCCT CGGCACAGCAGCTGAAAGCGCCATGCTCCACACTTTCTTAGCTAGGGCCGCCTATCCAATGCCCGCTAGCGCATTGCCAG CGGGACCCATCCAACAAGGCCTCTCAGCAAACGGCCGCAAGCAACTGCAGGCTGATCTCGAATTACTCATCAAAACTGAT GGTTTACCAGCAGGACTTCCTGCCAAGGCCAGGGTGCTGGTGGTCGAAGCTTCACAAGACGCAATCGTGGCCCCCGCTGC ACGAATCGCCTTGAAAGAAGCCCTGCTCAACCATCTACAAAGCCCCCCTTGCCATTGGATCTTGCCTGAGGCGGGGCATG CCTTGCTGATACCCGAACTCATTGAGCGAGTGCACAAGTGGCTGGAGTCAGCCCCTTGA
Upstream 100 bases:
>100_bases GCACGGCGCGCCTTCGGCTTGTGCTGCGCAGGGGGCTACCCGATGAGACATTGGAACGGCTGATGAGCGCCCTTGAAACT GGATGAAAGAGGTAATCGCC
Downstream 100 bases:
>100_bases GCAATCGCTGGTCAAAACAAGTGTTGAGCAACTTTGAGCAAGCTGCAACCACTTACAACAGCCAGGCGCAATTACAGCGT GCCGTTGCCTGGAGGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MHGWCGDSNTWQLWARHFQAHGWLWQSQEQGYATLPPLQPQWHNAPEPPAEQRRVVVGHSLGPHLLASEVLAQATDLVLL ASFGGFLPKGRANRALRTGLKGMQERLGTAAESAMLHTFLARAAYPMPASALPAGPIQQGLSANGRKQLQADLELLIKTD GLPAGLPAKARVLVVEASQDAIVAPAARIALKEALLNHLQSPPCHWILPEAGHALLIPELIERVHKWLESAP
Sequences:
>Translated_232_residues MHGWCGDSNTWQLWARHFQAHGWLWQSQEQGYATLPPLQPQWHNAPEPPAEQRRVVVGHSLGPHLLASEVLAQATDLVLL ASFGGFLPKGRANRALRTGLKGMQERLGTAAESAMLHTFLARAAYPMPASALPAGPIQQGLSANGRKQLQADLELLIKTD GLPAGLPAKARVLVVEASQDAIVAPAARIALKEALLNHLQSPPCHWILPEAGHALLIPELIERVHKWLESAP >Mature_232_residues MHGWCGDSNTWQLWARHFQAHGWLWQSQEQGYATLPPLQPQWHNAPEPPAEQRRVVVGHSLGPHLLASEVLAQATDLVLL ASFGGFLPKGRANRALRTGLKGMQERLGTAAESAMLHTFLARAAYPMPASALPAGPIQQGLSANGRKQLQADLELLIKTD GLPAGLPAKARVLVVEASQDAIVAPAARIALKEALLNHLQSPPCHWILPEAGHALLIPELIERVHKWLESAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25175; Mature: 25175
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGWCGDSNTWQLWARHFQAHGWLWQSQEQGYATLPPLQPQWHNAPEPPAEQRRVVVGHS CCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCEECCCCCCCCCCCCCCCHHHCEEEECCC LGPHLLASEVLAQATDLVLLASFGGFLPKGRANRALRTGLKGMQERLGTAAESAMLHTFL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAYPMPASALPAGPIQQGLSANGRKQLQADLELLIKTDGLPAGLPAKARVLVVEASQD HHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC AIVAPAARIALKEALLNHLQSPPCHWILPEAGHALLIPELIERVHKWLESAP CHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MHGWCGDSNTWQLWARHFQAHGWLWQSQEQGYATLPPLQPQWHNAPEPPAEQRRVVVGHS CCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCEECCCCCCCCCCCCCCCHHHCEEEECCC LGPHLLASEVLAQATDLVLLASFGGFLPKGRANRALRTGLKGMQERLGTAAESAMLHTFL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAYPMPASALPAGPIQQGLSANGRKQLQADLELLIKTDGLPAGLPAKARVLVVEASQD HHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC AIVAPAARIALKEALLNHLQSPPCHWILPEAGHALLIPELIERVHKWLESAP CHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA