Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968890

Identifier: 123968890

GI number: 123968890

Start: 1131201

End: 1131587

Strand: Reverse

Name: 123968890

Synonym: A9601_13571

Alternate gene names: NA

Gene position: 1131587-1131201 (Counterclockwise)

Preceding gene: 123968891

Following gene: 123968889

Centisome position: 67.76

GC content: 28.42

Gene sequence:

>387_bases
GTGGAAATAAATAAATTAGTCGATTTAAATAATCTAAGAAGCGCACCTCAATTAAGTAATAGTCAAGAAAAAAAACTTTT
AGAGGAATTAGAATCAAATATTTTTAATGCAGATTGGATAACAATAGGAATAATGGCACCAAGTGATATTAAAGCTATTG
AAACATTGAAATCAATTTCTAAGAAATATTCCTCAATTAAATTTGAGAATCTAGGCCCCCTTCATGCTGATGGAAGCGTT
TTTTTAAAAGCTAATCAAAAAACTAGTAATGTTTTTGTTAGATCTGAAAATGGTCTTGGAGAAGGAATTTTAATAACATG
TCAGTATGACGATGGTCTTAAAGAATCTAATACTTTTGGGCCATTACCATTAGATTTTTTTACATAA

Upstream 100 bases:

>100_bases
TCCCAATAGATAGGATTTATATCTCTTTTGAGGATGTTCCAGCTTCATTGTGGGCTTGGAATGGAAGAATATTTGGTTAG
AATTTTTATTTATATAGCCA

Downstream 100 bases:

>100_bases
TTAATTCTCCATTTATTTTTATCAAGGATCTATTTTAATGAAACTTTTTAATCAGATGATATTTTTGAGAACTTGGAATT
AAAGATAACTTTACCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSISKKYSSIKFENLGPLHADGSV
FLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFGPLPLDFFT

Sequences:

>Translated_128_residues
MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSISKKYSSIKFENLGPLHADGSV
FLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFGPLPLDFFT
>Mature_128_residues
MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSISKKYSSIKFENLGPLHADGSV
FLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFGPLPLDFFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14209; Mature: 14209

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSIS
CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
KKYSSIKFENLGPLHADGSVFLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFG
HHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC
PLPLDFFT
CCCCCCCC
>Mature Secondary Structure
MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSIS
CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
KKYSSIKFENLGPLHADGSVFLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFG
HHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC
PLPLDFFT
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA