Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968890
Identifier: 123968890
GI number: 123968890
Start: 1131201
End: 1131587
Strand: Reverse
Name: 123968890
Synonym: A9601_13571
Alternate gene names: NA
Gene position: 1131587-1131201 (Counterclockwise)
Preceding gene: 123968891
Following gene: 123968889
Centisome position: 67.76
GC content: 28.42
Gene sequence:
>387_bases GTGGAAATAAATAAATTAGTCGATTTAAATAATCTAAGAAGCGCACCTCAATTAAGTAATAGTCAAGAAAAAAAACTTTT AGAGGAATTAGAATCAAATATTTTTAATGCAGATTGGATAACAATAGGAATAATGGCACCAAGTGATATTAAAGCTATTG AAACATTGAAATCAATTTCTAAGAAATATTCCTCAATTAAATTTGAGAATCTAGGCCCCCTTCATGCTGATGGAAGCGTT TTTTTAAAAGCTAATCAAAAAACTAGTAATGTTTTTGTTAGATCTGAAAATGGTCTTGGAGAAGGAATTTTAATAACATG TCAGTATGACGATGGTCTTAAAGAATCTAATACTTTTGGGCCATTACCATTAGATTTTTTTACATAA
Upstream 100 bases:
>100_bases TCCCAATAGATAGGATTTATATCTCTTTTGAGGATGTTCCAGCTTCATTGTGGGCTTGGAATGGAAGAATATTTGGTTAG AATTTTTATTTATATAGCCA
Downstream 100 bases:
>100_bases TTAATTCTCCATTTATTTTTATCAAGGATCTATTTTAATGAAACTTTTTAATCAGATGATATTTTTGAGAACTTGGAATT AAAGATAACTTTACCTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSISKKYSSIKFENLGPLHADGSV FLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFGPLPLDFFT
Sequences:
>Translated_128_residues MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSISKKYSSIKFENLGPLHADGSV FLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFGPLPLDFFT >Mature_128_residues MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSISKKYSSIKFENLGPLHADGSV FLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFGPLPLDFFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14209; Mature: 14209
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSIS CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH KKYSSIKFENLGPLHADGSVFLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFG HHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC PLPLDFFT CCCCCCCC >Mature Secondary Structure MEINKLVDLNNLRSAPQLSNSQEKKLLEELESNIFNADWITIGIMAPSDIKAIETLKSIS CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH KKYSSIKFENLGPLHADGSVFLKANQKTSNVFVRSENGLGEGILITCQYDDGLKESNTFG HHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC PLPLDFFT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA