Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is maf [C]
Identifier: 123968869
GI number: 123968869
Start: 1111129
End: 1111740
Strand: Reverse
Name: maf [C]
Synonym: A9601_13361
Alternate gene names: 123968869
Gene position: 1111740-1111129 (Counterclockwise)
Preceding gene: 123968872
Following gene: 123968866
Centisome position: 66.58
GC content: 28.92
Gene sequence:
>612_bases GTGTTAATTCTAGCCTCTGCTTCTCAATCTAGAAAGAAATTACTAGAAAATTGTCAAATCGAATTTATCCAAATAGCAAG TAAATTTGATGAAACTACTATTCAAGAAAAGAATATATTTAATTTAGCTTTGGAATTATCTTTTCAAAAGGCTAATAGTT TATCTGAAAATATTCAAAACTTATCATTGCCCGAAGAATTTAATTATGGAACTATGGAAATACTTGGGTGCGATTCAATT TTTGAATTTAAAGGAGAAGCTTATGGAAAACCATCTAACAAAGAGGAGGCATTTATTAGATGGAAAAAAATGTCTGGAGA ATTTGGATTTTTACATACTGGTCATACTCTAATAATTGGGAATTTTGATTCAACTTCCAATATTTTTAAAATCACTGAAA TAATAAAAAAAACAGTAAGTTCAAGAGTTTATTTTTCTAATTTGGAGGATTGGGAAATCAAGAGTTATGTAGATACAAAT GAACCTTTATATTGCGCAGGAGGATTTGCCTTGGAAGGTATTGGTGGCAAATATATAGAAAAAATAGAGGGTTGTTTTAG TAATGTAATGGGTTTAAGTTTGCCATGGCTCAGAGAAAATTTATATAGATAA
Upstream 100 bases:
>100_bases TCCTTATTTCATGTAATTTTGCTTCTAACTCCATTAGTAATTTATATTAATTTTAAAATTTATTAATTATTAAATTGAAT TATAATTTGGTAAAAAATTT
Downstream 100 bases:
>100_bases TAAAATTGAGCAAAAAAAACCCTATCTAAAGATAGGGCTTTTTTAAAGATGAAATAGAAATTAATCTAGATCAGGCATTT CTAGAGCTGGTTCACTCTTT
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLILASASQSRKKLLENCQIEFIQIASKFDETTIQEKNIFNLALELSFQKANSLSENIQNLSLPEEFNYGTMEILGCDSI FEFKGEAYGKPSNKEEAFIRWKKMSGEFGFLHTGHTLIIGNFDSTSNIFKITEIIKKTVSSRVYFSNLEDWEIKSYVDTN EPLYCAGGFALEGIGGKYIEKIEGCFSNVMGLSLPWLRENLYR
Sequences:
>Translated_203_residues MLILASASQSRKKLLENCQIEFIQIASKFDETTIQEKNIFNLALELSFQKANSLSENIQNLSLPEEFNYGTMEILGCDSI FEFKGEAYGKPSNKEEAFIRWKKMSGEFGFLHTGHTLIIGNFDSTSNIFKITEIIKKTVSSRVYFSNLEDWEIKSYVDTN EPLYCAGGFALEGIGGKYIEKIEGCFSNVMGLSLPWLRENLYR >Mature_203_residues MLILASASQSRKKLLENCQIEFIQIASKFDETTIQEKNIFNLALELSFQKANSLSENIQNLSLPEEFNYGTMEILGCDSI FEFKGEAYGKPSNKEEAFIRWKKMSGEFGFLHTGHTLIIGNFDSTSNIFKITEIIKKTVSSRVYFSNLEDWEIKSYVDTN EPLYCAGGFALEGIGGKYIEKIEGCFSNVMGLSLPWLRENLYR
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=197, Percent_Identity=27.4111675126904, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI291045183, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=8e-12, Organism=Escherichia coli, GI87081830, Length=203, Percent_Identity=34.9753694581281, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1789646, Length=194, Percent_Identity=28.8659793814433, Blast_Score=81, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193202443, Length=202, Percent_Identity=29.7029702970297, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI78706856, Length=198, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1336_PROMS (A2BS59)
Other databases:
- EMBL: CP000551 - RefSeq: YP_001009727.1 - ProteinModelPortal: A2BS59 - SMR: A2BS59 - STRING: A2BS59 - GeneID: 4718055 - GenomeReviews: CP000551_GR - KEGG: pmb:A9601_13361 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: IFKITEI - PhylomeDB: A2BS59 - ProtClustDB: CLSK922120 - BioCyc: PMAR146891:A9601_13361-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 23124; Mature: 23124
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: ACT_SITE 31-31
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILASASQSRKKLLENCQIEFIQIASKFDETTIQEKNIFNLALELSFQKANSLSENIQN CEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHH LSLPEEFNYGTMEILGCDSIFEFKGEAYGKPSNKEEAFIRWKKMSGEFGFLHTGHTLIIG CCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCEEECCCEEEEE NFDSTSNIFKITEIIKKTVSSRVYFSNLEDWEIKSYVDTNEPLYCAGGFALEGIGGKYIE CCCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEHEEECCCCCEEEECCEEEECCCHHHHH KIEGCFSNVMGLSLPWLRENLYR HHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MLILASASQSRKKLLENCQIEFIQIASKFDETTIQEKNIFNLALELSFQKANSLSENIQN CEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHH LSLPEEFNYGTMEILGCDSIFEFKGEAYGKPSNKEEAFIRWKKMSGEFGFLHTGHTLIIG CCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCEEECCCEEEEE NFDSTSNIFKITEIIKKTVSSRVYFSNLEDWEIKSYVDTNEPLYCAGGFALEGIGGKYIE CCCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEHEEECCCCCEEEECCEEEECCCHHHHH KIEGCFSNVMGLSLPWLRENLYR HHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA