Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968768
Identifier: 123968768
GI number: 123968768
Start: 1052706
End: 1053095
Strand: Reverse
Name: 123968768
Synonym: A9601_12351
Alternate gene names: NA
Gene position: 1053095-1052706 (Counterclockwise)
Preceding gene: 123968769
Following gene: 123968767
Centisome position: 63.06
GC content: 28.72
Gene sequence:
>390_bases TTGTCCACTATTTGTCCACTTTATATATTTATGCGAAGGATTTTTATTGATTTCTGCGTTAATAATTTAGAGACATTTAA AACCTTTATGAAAAATTTTTCATTTTTAATTTTGGCATTAGCCTTTTTTATCGCATTACCTTCTTATTCCAATCCAACTT TTGAGAAAAATAGTTTTATTAAGATGCGCAAGCGATTTCAAAAGATCGATAAGAATGGAGATGGACTTCTTTCTAAAGGC GAGATGATAGAAGCTCATCGTGATCGTATAGATAAACTATTTTTGAATTTTGATAAGAATGCTGATGGCAAGTTATCAAA AAAAGAACTACGAGCAGTTAAGCAAGAAATGAAAAAAAGGATATATAAATTTAGAAATGAAGGGAATTAA
Upstream 100 bases:
>100_bases CCCAAAGCACTTCCCACCCCATTGCAAGCACTAGCGTTTCAAGCTATATCTATTTTTTTGCTTAGTTCTGCGTAGTTTGT CCTGACAATTCAAACAATAT
Downstream 100 bases:
>100_bases AGAATGTCTACAGACCTTAGTGCTTATATGCTCAAAGTCGCAAAGGGTGATAAGGCAGCTTTCCGATTCATTGCAAATTC TTTAGGATACAAAATGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSTICPLYIFMRRIFIDFCVNNLETFKTFMKNFSFLILALAFFIALPSYSNPTFEKNSFIKMRKRFQKIDKNGDGLLSKG EMIEAHRDRIDKLFLNFDKNADGKLSKKELRAVKQEMKKRIYKFRNEGN
Sequences:
>Translated_129_residues MSTICPLYIFMRRIFIDFCVNNLETFKTFMKNFSFLILALAFFIALPSYSNPTFEKNSFIKMRKRFQKIDKNGDGLLSKG EMIEAHRDRIDKLFLNFDKNADGKLSKKELRAVKQEMKKRIYKFRNEGN >Mature_128_residues STICPLYIFMRRIFIDFCVNNLETFKTFMKNFSFLILALAFFIALPSYSNPTFEKNSFIKMRKRFQKIDKNGDGLLSKGE MIEAHRDRIDKLFLNFDKNADGKLSKKELRAVKQEMKKRIYKFRNEGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15355; Mature: 15224
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTICPLYIFMRRIFIDFCVNNLETFKTFMKNFSFLILALAFFIALPSYSNPTFEKNSFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH KMRKRFQKIDKNGDGLLSKGEMIEAHRDRIDKLFLNFDKNADGKLSKKELRAVKQEMKKR HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH IYKFRNEGN HHHHHCCCC >Mature Secondary Structure STICPLYIFMRRIFIDFCVNNLETFKTFMKNFSFLILALAFFIALPSYSNPTFEKNSFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH KMRKRFQKIDKNGDGLLSKGEMIEAHRDRIDKLFLNFDKNADGKLSKKELRAVKQEMKKR HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH IYKFRNEGN HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA