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The map label for this gene is 123968239

Identifier: 123968239

GI number: 123968239

Start: 627727

End: 629367

Strand: Reverse

Name: 123968239

Synonym: A9601_07041

Alternate gene names: NA

Gene position: 629367-627727 (Counterclockwise)

Preceding gene: 123968241

Following gene: 123968236

Centisome position: 37.69

GC content: 35.83

Gene sequence:

>1641_bases
TTGGATATAAGTCCTTATGATGCAATTGTTGTTGGTTCTGGAGCTACAGGAGGAATAGCAGCACTTACATTGGCAGAACA
AGGAATCAAAGTTTTAGTAATAGAAGCAGGGCCTCAAGTTAAAAGGCATGAAGCTAGTAATGATGAGCCAAAAAGTACAT
TCAAAAGATTATCAGGAGTTTTAACAAAAAAACATGCCAATCAATGCCAACATCCTGGTTATTGGAAAAATAATCCTGAC
TTATATTCAAATGAATTGAAGCATCCTTATGACTTCCCAACAAAAAAGCCATTTCTTTGGACCCAAGGTAAACAATATGG
GGGGAGATCATTAACTTGGGGAGGCATAACATTAAGACTTTCCTCAGAAGACTTTCATCCTGCTAAAAAAGACGGATTCG
GACCAAACTGGCCTATTTCATACGATGAACTATCCCCTCACTATGATTTCATTGAAAATTTTTGCGGCATCTATGGACGA
AAAGATGACATTAAAGAAGTCCCAAACGGTAAATATATTGGAGAAATACCTCTTACAGAAAACGAAAATGTTTTTGGTAA
CAAAGTAAAATCAAAATTAAACTATCCATTTATCCAATCAAGAGGATTTGACCGTAATTCATCAGTAAAAGAAAAAAAAT
GGCCAAAGTCCTCTAGCTTAGGAAGCTCTTTAAAAAAAGCTTTAGATACTGGAAATGTACAAATAATCTCTAATTACCTA
GTGGAGTCTTTTGAGATTAACAAGGCAACAGAGCTTGCCTCAAAACTAACGATCGTAAACCTAGAAAATGGACAAAAAGA
AGTCTTGAATTGTGATTTAATTTTTCTCTGCGCGTCAACAATTTCAACACTCAGAATACTACTAAACTCAGAATATAAAA
CAAATTCCTCAGGGTTTAAAGATAATTCTGGGAAATTAGGCAAATACCTCATGGATCACATATCTATCTGTAGATTTTTT
TCAGTCCCAAAAACAAAAAACTCAGATAAACCAGTAGATAATCCACCCGATCTTTCTGGAGCAGGCAGCTTCTTTATTCC
ATTTGGTTCAAATTTACCAGAAATTGACGACATAAATTTCCATAGAGGTTATGGAATCTGGGGGGCAATTGATCGATTAG
GGATTCCTAAATTTTTGCAAAAAGACACAAACACATCCATTGGCTTTCTTATCGCCCATGGCGAAGTCCTTCCTAGAGAG
AAAAACTCAGTTTCTCTCTCACGAAAAACAGATGAATGGGGTATCCCAATTCCCTTCATTGAATTCGAATGGAGCAAAAA
TGAATTAAATATGGCTAAACATATGGAAAACACAATACGTAAATCAATCACAGCTGCTAATGGAGAAATAAAAAATATTA
ATGAACTAATTAATATCCCATTAGGGAGTCTATTTACAAAAAATTTGATCGCACTTTCAGATAGTCCTCCTCCTCCTGGA
TATTACATTCATGAAGTAGGGGGGGCACCAATGGGGATAGATGAAGAAAATAGCGTAGTTGATAAATTTAATAGATTATG
GAGATGCAAGAATGTACTTGTATTAGATGGAGCATGCTGGCCCACATCATCTTGGCAAAGCCCTACACTTACGATGATGG
CCTTGAGTAGAAGAGCCTGCTTAAATATTAAAAAGACTTAG

Upstream 100 bases:

>100_bases
AGTAGTATTTCAATAAATTCTAACTTCTTAAGCTGAAATCTAAAAATTAATTATTTACTGAATGCTATATTTATTGAAAT
AACAAATCACGAACTAGGTT

Downstream 100 bases:

>100_bases
ATGGTGTAAATAATTGATTTAAATAAATTTCTGAGACAGCATTATCTGTACATCCGTTTTGAACGAAAAAAGTAGCTAAT
GCTGAATTTATAAGCTTATA

Product: glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; Oxidoreductase Protein; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; Gluconate 2-Dehydrogenase; Fad Dependent Oxidoreductase; Choline Dehydrogenase And Flavoproteins-Like Protein; Dehydrogluconate Dehydrogenase; Choline Dehydrogenase-Like Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Oxidoreductase Chain; GMC Oxidoreductase Family; Oxidoreductase GMC Family Protein

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRHEASNDEPKSTFKRLSGVLTKKHANQCQHPGYWKNNPD
LYSNELKHPYDFPTKKPFLWTQGKQYGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYDELSPHYDFIENFCGIYGR
KDDIKEVPNGKYIGEIPLTENENVFGNKVKSKLNYPFIQSRGFDRNSSVKEKKWPKSSSLGSSLKKALDTGNVQIISNYL
VESFEINKATELASKLTIVNLENGQKEVLNCDLIFLCASTISTLRILLNSEYKTNSSGFKDNSGKLGKYLMDHISICRFF
SVPKTKNSDKPVDNPPDLSGAGSFFIPFGSNLPEIDDINFHRGYGIWGAIDRLGIPKFLQKDTNTSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPFIEFEWSKNELNMAKHMENTIRKSITAANGEIKNINELINIPLGSLFTKNLIALSDSPPPPG
YYIHEVGGAPMGIDEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRACLNIKKT

Sequences:

>Translated_546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRHEASNDEPKSTFKRLSGVLTKKHANQCQHPGYWKNNPD
LYSNELKHPYDFPTKKPFLWTQGKQYGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYDELSPHYDFIENFCGIYGR
KDDIKEVPNGKYIGEIPLTENENVFGNKVKSKLNYPFIQSRGFDRNSSVKEKKWPKSSSLGSSLKKALDTGNVQIISNYL
VESFEINKATELASKLTIVNLENGQKEVLNCDLIFLCASTISTLRILLNSEYKTNSSGFKDNSGKLGKYLMDHISICRFF
SVPKTKNSDKPVDNPPDLSGAGSFFIPFGSNLPEIDDINFHRGYGIWGAIDRLGIPKFLQKDTNTSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPFIEFEWSKNELNMAKHMENTIRKSITAANGEIKNINELINIPLGSLFTKNLIALSDSPPPPG
YYIHEVGGAPMGIDEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRACLNIKKT
>Mature_546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRHEASNDEPKSTFKRLSGVLTKKHANQCQHPGYWKNNPD
LYSNELKHPYDFPTKKPFLWTQGKQYGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYDELSPHYDFIENFCGIYGR
KDDIKEVPNGKYIGEIPLTENENVFGNKVKSKLNYPFIQSRGFDRNSSVKEKKWPKSSSLGSSLKKALDTGNVQIISNYL
VESFEINKATELASKLTIVNLENGQKEVLNCDLIFLCASTISTLRILLNSEYKTNSSGFKDNSGKLGKYLMDHISICRFF
SVPKTKNSDKPVDNPPDLSGAGSFFIPFGSNLPEIDDINFHRGYGIWGAIDRLGIPKFLQKDTNTSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPFIEFEWSKNELNMAKHMENTIRKSITAANGEIKNINELINIPLGSLFTKNLIALSDSPPPPG
YYIHEVGGAPMGIDEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRACLNIKKT

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60892; Mature: 60892

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRHEASNDEPKSTFKRLSGV
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHHH
LTKKHANQCQHPGYWKNNPDLYSNELKHPYDFPTKKPFLWTQGKQYGGRSLTWGGITLRL
HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SSEDFHPAKKDGFGPNWPISYDELSPHYDFIENFCGIYGRKDDIKEVPNGKYIGEIPLTE
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCC
NENVFGNKVKSKLNYPFIQSRGFDRNSSVKEKKWPKSSSLGSSLKKALDTGNVQIISNYL
CCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHH
VESFEINKATELASKLTIVNLENGQKEVLNCDLIFLCASTISTLRILLNSEYKTNSSGFK
HHHHCCCHHHHHHHEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DNSGKLGKYLMDHISICRFFSVPKTKNSDKPVDNPPDLSGAGSFFIPFGSNLPEIDDINF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
HRGYGIWGAIDRLGIPKFLQKDTNTSIGFLIAHGEVLPREKNSVSLSRKTDEWGIPIPFI
CCCCCHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE
EFEWSKNELNMAKHMENTIRKSITAANGEIKNINELINIPLGSLFTKNLIALSDSPPPPG
EEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCC
YYIHEVGGAPMGIDEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRAC
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
LNIKKT
CCCCCC
>Mature Secondary Structure
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRHEASNDEPKSTFKRLSGV
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHHH
LTKKHANQCQHPGYWKNNPDLYSNELKHPYDFPTKKPFLWTQGKQYGGRSLTWGGITLRL
HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SSEDFHPAKKDGFGPNWPISYDELSPHYDFIENFCGIYGRKDDIKEVPNGKYIGEIPLTE
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCC
NENVFGNKVKSKLNYPFIQSRGFDRNSSVKEKKWPKSSSLGSSLKKALDTGNVQIISNYL
CCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHH
VESFEINKATELASKLTIVNLENGQKEVLNCDLIFLCASTISTLRILLNSEYKTNSSGFK
HHHHCCCHHHHHHHEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DNSGKLGKYLMDHISICRFFSVPKTKNSDKPVDNPPDLSGAGSFFIPFGSNLPEIDDINF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
HRGYGIWGAIDRLGIPKFLQKDTNTSIGFLIAHGEVLPREKNSVSLSRKTDEWGIPIPFI
CCCCCHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE
EFEWSKNELNMAKHMENTIRKSITAANGEIKNINELINIPLGSLFTKNLIALSDSPPPPG
EEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCC
YYIHEVGGAPMGIDEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRAC
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
LNIKKT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA