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The map label for this gene is 123968236

Identifier: 123968236

GI number: 123968236

Start: 624654

End: 625928

Strand: Reverse

Name: 123968236

Synonym: A9601_07011

Alternate gene names: NA

Gene position: 625928-624654 (Counterclockwise)

Preceding gene: 123968239

Following gene: 123968235

Centisome position: 37.48

GC content: 30.2

Gene sequence:

>1275_bases
GTGAAAAATAATAGTTTGCTTGAAGTTCCAAATATCAACTCAAAAGATGCAAAATTAAAGAAATTAATTTATGACGTTGA
TGAGTCCTTATTTTATGAGGATAACTATTCTAATGAAGAATTCGAGCACCTTTGCGTATGCAGTGGAGGTACAACCTCTA
GCTGTGCAAAAAATGGTTTTACAACTCTTGATCTAAGAAAAAATTACAACAAAATTCACCTAGATAGAAAAACCAATTTA
GTGACAATTGGAGGTGGAGTAATAATGGGGGATCTAGTAAATCATTTACAAAAACATAATCGAAGTTTTCCAATCGGACT
TTCTAAACTTCCTGGAGCAGGCTATATACTCACTGGTGGAGTAAGCCCGCTCAGTAGAGCCTACGGATTAGCTATTGATA
ATATTGAATCAATAAAAGGTTTCTTGGGAAATGGCACATTTATCTCTTTAAAAAAAAATCAAATAAATCCAGAAGAACAA
TTGATTTGGGAAGCAATTAAAGGCGCAGCACCCTTCTTTTCAATTATTACTGAAATAGAACTTAAGACTATCCAATCTAA
TCCAATCAAGGTTATTGAAGGATTTGTAAATCCAAATGAACTTTCAGAAATAATAAAACTATCAGAGGAATTTCCAGAAA
ATATTAGTCTTCAATGGATTTATGCCCAAAAAATTTATATATATATTTTTGCTGAGCTTAATAATTTAGAGGATAAAAGA
ACAGAAGAAAACTTAATGCTTCTAGACAAATTTCCTACTCTTGAAAAACAATTTTATGAAAACTTTAACAAAATTAATTT
TTTCCCAAAGGAATTGAATTTATATGAGCTGAATGCAAATAACCATTCTGAGGTAATTAGTCTTCTTGGAGAAGATTTAA
AAAATGATATTCCAATTTTTATAAAATGTTTGAGTGAAATAATGGAAAATAAACCTAATAATTCCTGTTATATTGCTTCT
CAACAATTAGGTGGCAAAACTAAAAAGTTAAATCATGGAGCAAGCTTTTTTGTTCATAGAAAAAGTACTTGGAAACCATG
GATATATGCATCATGGAAAAAAAATGATCTTCAAGAAAAAGAAGTCGCTCTGGAATGGATTTATAAATCATGGAGCAAGC
TAAAAAGGTTTTATCCAAATATTCACTTAGCCCAATTGCATAATCATTTGAATTCTCATGAAGAAGAAATTACATTAGCC
TTTGGAAATAGAATGAACGAATTAAAAACTTTAAAGAATATTTTTGACCCACAAGGTATTTTGCCTCCTCTATGA

Upstream 100 bases:

>100_bases
CCACAGATAAGTATCGCGACTTGATTATTTAACTTCGAATCTAAATTATCCAAAATCAAGTTATTACTTATACCATAATA
GTAAAGAACAATATCATGTA

Downstream 100 bases:

>100_bases
GGTAACTTTTTAATTATAAAGAAACTTAAAATGTCAAATTTCTCAAGATATTTATCTAAAAATTGGTTAGATGATCCAAA
GTCAAATATTCTCTCTGGCT

Product: FAD linked oxidase, N-terminal

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKNNSLLEVPNINSKDAKLKKLIYDVDESLFYEDNYSNEEFEHLCVCSGGTTSSCAKNGFTTLDLRKNYNKIHLDRKTNL
VTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRAYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQ
LIWEAIKGAAPFFSIITEIELKTIQSNPIKVIEGFVNPNELSEIIKLSEEFPENISLQWIYAQKIYIYIFAELNNLEDKR
TEENLMLLDKFPTLEKQFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIFIKCLSEIMENKPNNSCYIAS
QQLGGKTKKLNHGASFFVHRKSTWKPWIYASWKKNDLQEKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLNSHEEEITLA
FGNRMNELKTLKNIFDPQGILPPL

Sequences:

>Translated_424_residues
MKNNSLLEVPNINSKDAKLKKLIYDVDESLFYEDNYSNEEFEHLCVCSGGTTSSCAKNGFTTLDLRKNYNKIHLDRKTNL
VTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRAYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQ
LIWEAIKGAAPFFSIITEIELKTIQSNPIKVIEGFVNPNELSEIIKLSEEFPENISLQWIYAQKIYIYIFAELNNLEDKR
TEENLMLLDKFPTLEKQFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIFIKCLSEIMENKPNNSCYIAS
QQLGGKTKKLNHGASFFVHRKSTWKPWIYASWKKNDLQEKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLNSHEEEITLA
FGNRMNELKTLKNIFDPQGILPPL
>Mature_424_residues
MKNNSLLEVPNINSKDAKLKKLIYDVDESLFYEDNYSNEEFEHLCVCSGGTTSSCAKNGFTTLDLRKNYNKIHLDRKTNL
VTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRAYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQ
LIWEAIKGAAPFFSIITEIELKTIQSNPIKVIEGFVNPNELSEIIKLSEEFPENISLQWIYAQKIYIYIFAELNNLEDKR
TEENLMLLDKFPTLEKQFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIFIKCLSEIMENKPNNSCYIAS
QQLGGKTKKLNHGASFFVHRKSTWKPWIYASWKKNDLQEKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLNSHEEEITLA
FGNRMNELKTLKNIFDPQGILPPL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 48625; Mature: 48625

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNSLLEVPNINSKDAKLKKLIYDVDESLFYEDNYSNEEFEHLCVCSGGTTSSCAKNGF
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCHHHHCCC
TTLDLRKNYNKIHLDRKTNLVTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGG
EEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
VSPLSRAYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQLIWEAIKGAAPFFSIITEIE
CCHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LKTIQSNPIKVIEGFVNPNELSEIIKLSEEFPENISLQWIYAQKIYIYIFAELNNLEDKR
HEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCC
TEENLMLLDKFPTLEKQFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIF
CCCCEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCHHH
IKCLSEIMENKPNNSCYIASQQLGGKTKKLNHGASFFVHRKSTWKPWIYASWKKNDLQEK
HHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHH
EVALEWIYKSWSKLKRFYPNIHLAQLHNHLNSHEEEITLAFGNRMNELKTLKNIFDPQGI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
LPPL
CCCC
>Mature Secondary Structure
MKNNSLLEVPNINSKDAKLKKLIYDVDESLFYEDNYSNEEFEHLCVCSGGTTSSCAKNGF
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCHHHHCCC
TTLDLRKNYNKIHLDRKTNLVTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGG
EEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
VSPLSRAYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQLIWEAIKGAAPFFSIITEIE
CCHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LKTIQSNPIKVIEGFVNPNELSEIIKLSEEFPENISLQWIYAQKIYIYIFAELNNLEDKR
HEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCC
TEENLMLLDKFPTLEKQFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIF
CCCCEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCHHH
IKCLSEIMENKPNNSCYIASQQLGGKTKKLNHGASFFVHRKSTWKPWIYASWKKNDLQEK
HHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHH
EVALEWIYKSWSKLKRFYPNIHLAQLHNHLNSHEEEITLAFGNRMNELKTLKNIFDPQGI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
LPPL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]