Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968196
Identifier: 123968196
GI number: 123968196
Start: 584795
End: 585130
Strand: Reverse
Name: 123968196
Synonym: A9601_06611
Alternate gene names: NA
Gene position: 585130-584795 (Counterclockwise)
Preceding gene: 123968197
Following gene: 123968190
Centisome position: 35.04
GC content: 30.06
Gene sequence:
>336_bases ATGTTTAATCCAGAATTTCTTGCTACTGAAAATAATGATCCAAACGATGAAAATGATTTAATCCAATATTTACAAAAACA ATCTCCAGAAGTTTTGCAAAGAGTAGCAAAATCAGCCAGTGAAGATATTCAAGAAATTATTAGACATAATGTTCAAGGCC TTCTTGGAATGCTTCCTTCAGATCAATTTGATGTAAGAATAACATCTTCAAAAGACAACATTGCTAATTTATTATCTTCC GCAATGATGACAGGTTATTTCTTAAGACAAATGGAGCAAAGAAAAGAGTTGGAACAAACTCTTAAAAATGATGAAAACAT GTCTATAGAAGAATAA
Upstream 100 bases:
>100_bases GCCGTTAAATAAAATTGGACCTATTCGGTTCCCTGCCCTTAATAATTTGAATTAATGGGTACTTGATGTTGTAGGGTTTT TATATCTTGAAGCTGTAGAA
Downstream 100 bases:
>100_bases TAGTTTTTAAAGATTTACTTCTTTAGGAATTATTCCTAATTCAAGCAACTTTTTATATAAACCCATCAAGAATTTATTAT CCTCAGGAAGTTTGTCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRVAKSASEDIQEIIRHNVQGLLGMLPSDQFDVRITSSKDNIANLLSS AMMTGYFLRQMEQRKELEQTLKNDENMSIEE
Sequences:
>Translated_111_residues MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRVAKSASEDIQEIIRHNVQGLLGMLPSDQFDVRITSSKDNIANLLSS AMMTGYFLRQMEQRKELEQTLKNDENMSIEE >Mature_111_residues MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRVAKSASEDIQEIIRHNVQGLLGMLPSDQFDVRITSSKDNIANLLSS AMMTGYFLRQMEQRKELEQTLKNDENMSIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12822; Mature: 12822
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRVAKSASEDIQEIIRHNVQGLLGMLPS CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQFDVRITSSKDNIANLLSSAMMTGYFLRQMEQRKELEQTLKNDENMSIEE CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRVAKSASEDIQEIIRHNVQGLLGMLPS CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQFDVRITSSKDNIANLLSSAMMTGYFLRQMEQRKELEQTLKNDENMSIEE CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA