Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968190
Identifier: 123968190
GI number: 123968190
Start: 579124
End: 579546
Strand: Reverse
Name: 123968190
Synonym: A9601_06551
Alternate gene names: NA
Gene position: 579546-579124 (Counterclockwise)
Preceding gene: 123968196
Following gene: 123968189
Centisome position: 34.71
GC content: 36.64
Gene sequence:
>423_bases ATGTCTAATTCAAATTTCAGCAATAATCCTGGACAAGAAAATTACAGAGGTCGTTCTAACAATGAAAGACCTAATTTCAG AGAGAGATCGGGCGGCAGAAGAGATGGAGGAGGATTCCGCATAAGATTGAGTGATAACGAAATGAAAGCTGTTAAATCAA TACAAGAGACCTTCCAATTAAGATCTACCGTTGCAGTTCTGGGTTTCTCTGTTAGAACACTTAGCGAAATGATCAAGGAC GAAAAACTGATTGAATCAATCAAAGAATATGCAAAAAATAATAAAAACTCTTCTCCCAGTAGACAATCACAAAATTCTTA TGAAGAAAAGACAAAAACAGCACCTGACCCTTTTGCAAGACCTGTAAAAAGTACATCAACTGAAGAGATCCAATCTAGCG AAGTAGAAGAGGATGGCAAATAA
Upstream 100 bases:
>100_bases TCGTTAATCAAAAGATAAAAATTTAAGCCTTTTAAAAAGACTTATTGCATAACAAGATGCTAAGTTAATAGACTATTTAA ATAACTTAAGAAACATTAAG
Downstream 100 bases:
>100_bases AAAAAGAATTCTTTCGGGAGTTCAACCAACTGGTGATTTACATATTGGGAATTGGCTTGGGGCCATAAATAATTGGGTTG AGCTTCAAGATCAATATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSNSNFSNNPGQENYRGRSNNERPNFRERSGGRRDGGGFRIRLSDNEMKAVKSIQETFQLRSTVAVLGFSVRTLSEMIKD EKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFARPVKSTSTEEIQSSEVEEDGK
Sequences:
>Translated_140_residues MSNSNFSNNPGQENYRGRSNNERPNFRERSGGRRDGGGFRIRLSDNEMKAVKSIQETFQLRSTVAVLGFSVRTLSEMIKD EKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFARPVKSTSTEEIQSSEVEEDGK >Mature_139_residues SNSNFSNNPGQENYRGRSNNERPNFRERSGGRRDGGGFRIRLSDNEMKAVKSIQETFQLRSTVAVLGFSVRTLSEMIKDE KLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFARPVKSTSTEEIQSSEVEEDGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15859; Mature: 15727
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSNFSNNPGQENYRGRSNNERPNFRERSGGRRDGGGFRIRLSDNEMKAVKSIQETFQL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RSTVAVLGFSVRTLSEMIKDEKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH PVKSTSTEEIQSSEVEEDGK CCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure SNSNFSNNPGQENYRGRSNNERPNFRERSGGRRDGGGFRIRLSDNEMKAVKSIQETFQL CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RSTVAVLGFSVRTLSEMIKDEKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH PVKSTSTEEIQSSEVEEDGK CCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA