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The map label for this gene is ydjH [C]

Identifier: 123968097

GI number: 123968097

Start: 488434

End: 489435

Strand: Reverse

Name: ydjH [C]

Synonym: A9601_05621

Alternate gene names: 123968097

Gene position: 489435-488434 (Counterclockwise)

Preceding gene: 123968098

Following gene: 123968094

Centisome position: 29.31

GC content: 32.53

Gene sequence:

>1002_bases
ATGAAGGAATCCTTTAGACATTTTGAACATAAAAAAGTTGATCTCATTGGTCTGGGCAACGCAATAGTAGATATTATTGT
AAATATTGAAGATGAGTTTCTTGAGATAAATCATCTTGATAAAGGATCAATGAATCTAATAAATTCTGATGAATCACAGA
AATTGTTAGAAAATTGCAAAGTGATAAAACAAATTTCAGGTGGGTCCTCAGCAAATACCGTGGTTTCTTTAGCAGAATTA
GGCAATCATGTGCAGTTTATAGGGAGAGTGAAAAATGATCAATTTGGGGATTTCTTTTCTGACGATATAAAAAAAAGTAA
GACTATATTTAATACTCCACCAACTATTGAAGGTGCTCCAACAGCTCATTCAATCATTTTGGTAACACCTGATGCCCAAA
GAACTATGTGCACTTACCTAGGTGCATCTGTAGAGTTTGAACCAAAAGACATTGACTTTACTGTAATTAAGGAAAGTAAA
TACTTATATTTAGAAGGATATTTATGGGACAGCGAATTAGCTAAAAAAGCTTTTATTAAAGCCGCCCAAATTGCAAAACA
ATCTAGTACAAAAATAATCCTTTCTTTGTCTGATTCATTTTGTGTAGATAGACATCGTGAGAGTTTCTTGGAATTAATTT
ATGAATACGTAGATATTGTTTTTTGTAATGAATCCGAGGTGTTAAGTCTATTTAAAAATGATAAATTAGCAAGCTGCCAA
GAAGACCTATCTTCCTTATGTGAATTAGTCATAGTAACTCTTGGAAGCAATGGTTCTCTCATAGTTAACAAAAATAATAT
TGAAATAATTGAGTCAATAACGAAAGGCAAGATTATTGATACTACAGGAGCGGGAGATATCTATGCGGGAGGATTTATCC
ATGGATTAATAAACAATTGTTCCCTCAAAAAATGCGGAGAGATAGCTTCAATTTGTGCGGGGCAAATAATTACGCAATTA
GGATCTAGATCGGATATTGATCTTAAAGAGTTAATAAAATAG

Upstream 100 bases:

>100_bases
CATTGTCTCGTTGGGGGCAAATAGAGATCAAACCATTGTAATTGAAGACCCAATACATGGTCCTAAAAGAGCACTGCTAA
GGTAATTTAGTTCCAAATTA

Downstream 100 bases:

>100_bases
ATTAATCAAATAGTCTTATTCAACCAATCATAATATTTCATCTCAGCATGGTATTTTTTGTAAATAATCTGAGGGACATC
ATATGTGGAATTTTTATTTA

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKESFRHFEHKKVDLIGLGNAIVDIIVNIEDEFLEINHLDKGSMNLINSDESQKLLENCKVIKQISGGSSANTVVSLAEL
GNHVQFIGRVKNDQFGDFFSDDIKKSKTIFNTPPTIEGAPTAHSIILVTPDAQRTMCTYLGASVEFEPKDIDFTVIKESK
YLYLEGYLWDSELAKKAFIKAAQIAKQSSTKIILSLSDSFCVDRHRESFLELIYEYVDIVFCNESEVLSLFKNDKLASCQ
EDLSSLCELVIVTLGSNGSLIVNKNNIEIIESITKGKIIDTTGAGDIYAGGFIHGLINNCSLKKCGEIASICAGQIITQL
GSRSDIDLKELIK

Sequences:

>Translated_333_residues
MKESFRHFEHKKVDLIGLGNAIVDIIVNIEDEFLEINHLDKGSMNLINSDESQKLLENCKVIKQISGGSSANTVVSLAEL
GNHVQFIGRVKNDQFGDFFSDDIKKSKTIFNTPPTIEGAPTAHSIILVTPDAQRTMCTYLGASVEFEPKDIDFTVIKESK
YLYLEGYLWDSELAKKAFIKAAQIAKQSSTKIILSLSDSFCVDRHRESFLELIYEYVDIVFCNESEVLSLFKNDKLASCQ
EDLSSLCELVIVTLGSNGSLIVNKNNIEIIESITKGKIIDTTGAGDIYAGGFIHGLINNCSLKKCGEIASICAGQIITQL
GSRSDIDLKELIK
>Mature_333_residues
MKESFRHFEHKKVDLIGLGNAIVDIIVNIEDEFLEINHLDKGSMNLINSDESQKLLENCKVIKQISGGSSANTVVSLAEL
GNHVQFIGRVKNDQFGDFFSDDIKKSKTIFNTPPTIEGAPTAHSIILVTPDAQRTMCTYLGASVEFEPKDIDFTVIKESK
YLYLEGYLWDSELAKKAFIKAAQIAKQSSTKIILSLSDSFCVDRHRESFLELIYEYVDIVFCNESEVLSLFKNDKLASCQ
EDLSSLCELVIVTLGSNGSLIVNKNNIEIIESITKGKIIDTTGAGDIYAGGFIHGLINNCSLKKCGEIASICAGQIITQL
GSRSDIDLKELIK

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484973, Length=334, Percent_Identity=21.8562874251497, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI32484975, Length=334, Percent_Identity=21.8562874251497, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI11545855, Length=276, Percent_Identity=24.6376811594203, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87081971, Length=331, Percent_Identity=24.773413897281, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786684, Length=256, Percent_Identity=24.21875, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17541820, Length=329, Percent_Identity=24.0121580547112, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17532905, Length=269, Percent_Identity=26.7657992565056, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322565, Length=336, Percent_Identity=24.1071428571429, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571668, Length=358, Percent_Identity=22.3463687150838, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355521, Length=350, Percent_Identity=26, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24663633, Length=338, Percent_Identity=21.8934911242604, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21356339, Length=338, Percent_Identity=21.8934911242604, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 36788; Mature: 36788

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESFRHFEHKKVDLIGLGNAIVDIIVNIEDEFLEINHLDKGSMNLINSDESQKLLENCK
CCCHHHHHHCCCEEEEECCHHHEEEEECCCHHEEEECCCCCCCCCCCCCCHHHHHHHHHH
VIKQISGGSSANTVVSLAELGNHVQFIGRVKNDQFGDFFSDDIKKSKTIFNTPPTIEGAP
HHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCEECCCCCCCCCC
TAHSIILVTPDAQRTMCTYLGASVEFEPKDIDFTVIKESKYLYLEGYLWDSELAKKAFIK
CCCEEEEECCCCHHHHHHHHCCCEEECCCCCEEEEEECCCEEEEEEEEEHHHHHHHHHHH
AAQIAKQSSTKIILSLSDSFCVDRHRESFLELIYEYVDIVFCNESEVLSLFKNDKLASCQ
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCHHHHH
EDLSSLCELVIVTLGSNGSLIVNKNNIEIIESITKGKIIDTTGAGDIYAGGFIHGLINNC
HHHHHHHHHEEEEECCCCEEEEECCCHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHCCC
SLKKCGEIASICAGQIITQLGSRSDIDLKELIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure
MKESFRHFEHKKVDLIGLGNAIVDIIVNIEDEFLEINHLDKGSMNLINSDESQKLLENCK
CCCHHHHHHCCCEEEEECCHHHEEEEECCCHHEEEECCCCCCCCCCCCCCHHHHHHHHHH
VIKQISGGSSANTVVSLAELGNHVQFIGRVKNDQFGDFFSDDIKKSKTIFNTPPTIEGAP
HHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCEECCCCCCCCCC
TAHSIILVTPDAQRTMCTYLGASVEFEPKDIDFTVIKESKYLYLEGYLWDSELAKKAFIK
CCCEEEEECCCCHHHHHHHHCCCEEECCCCCEEEEEECCCEEEEEEEEEHHHHHHHHHHH
AAQIAKQSSTKIILSLSDSFCVDRHRESFLELIYEYVDIVFCNESEVLSLFKNDKLASCQ
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCHHHHH
EDLSSLCELVIVTLGSNGSLIVNKNNIEIIESITKGKIIDTTGAGDIYAGGFIHGLINNC
HHHHHHHHHEEEEECCCCEEEEECCCHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHCCC
SLKKCGEIASICAGQIITQLGSRSDIDLKELIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]