Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968092
Identifier: 123968092
GI number: 123968092
Start: 486102
End: 486632
Strand: Reverse
Name: 123968092
Synonym: A9601_05571
Alternate gene names: NA
Gene position: 486632-486102 (Counterclockwise)
Preceding gene: 123968094
Following gene: 123968091
Centisome position: 29.14
GC content: 32.02
Gene sequence:
>531_bases ATGAAGAAATACTTATCGCCTGGAAACTTAATCGTAACCGCTGGGGGTATATTAGCTTTTGTTGGAATGACTGCTTATTT TACAGACTCAGTAAATTTAAGTGTACCTACTTTTTTTTATGGAGTACCTATTTTCCTAATTGGCTTAGGCTTAAAGACTT CCGAAATACCTCCTGTAGAGTTATTTGACAAGACAAATTTTGCGACAAATAAATTTAATAGACCAAAAGAACTAACAGCA TTAGTTAAAGATGTTACAAGATGGAGGTATGGGATAAAAGCTCATCTTGAATCGTCATTAGAATCTTTAAATTTGTGGGA CGAGGATAACCCCCCTCAATTAAAAGAAATAGAAGAAATTACAAAGGAAGAAAAAAATGGTCTCAGAATGCGTTTCGTAT TAAACGCTGTTCCTCTAGAAAAATGGGTTGAAAAACAAGAAAGATTAAATAGGTTTTTCGTCAAAGGTCTTGAATCAGAA TTTATTATGGACGATAATAAAAAAGAATTTGATTTTATTCTCTTTTATTGA
Upstream 100 bases:
>100_bases CTATCTTGATCAAGTTTAAAAATTAAATCTCCTTGATTTACAGTATTAGAATCTTGCACAATACTTGTTAGCCCATTCAA ACTCATTCTACTAAATCAAA
Downstream 100 bases:
>100_bases ATATAGGGATATATTTGTAAAAACCTAATTTCTCAATTCAATCAAGTTTTATAAATTTTAATAATGAATGATTCTCAAAG AGTATCAATATTAAGCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKKYLSPGNLIVTAGGILAFVGMTAYFTDSVNLSVPTFFYGVPIFLIGLGLKTSEIPPVELFDKTNFATNKFNRPKELTA LVKDVTRWRYGIKAHLESSLESLNLWDEDNPPQLKEIEEITKEEKNGLRMRFVLNAVPLEKWVEKQERLNRFFVKGLESE FIMDDNKKEFDFILFY
Sequences:
>Translated_176_residues MKKYLSPGNLIVTAGGILAFVGMTAYFTDSVNLSVPTFFYGVPIFLIGLGLKTSEIPPVELFDKTNFATNKFNRPKELTA LVKDVTRWRYGIKAHLESSLESLNLWDEDNPPQLKEIEEITKEEKNGLRMRFVLNAVPLEKWVEKQERLNRFFVKGLESE FIMDDNKKEFDFILFY >Mature_176_residues MKKYLSPGNLIVTAGGILAFVGMTAYFTDSVNLSVPTFFYGVPIFLIGLGLKTSEIPPVELFDKTNFATNKFNRPKELTA LVKDVTRWRYGIKAHLESSLESLNLWDEDNPPQLKEIEEITKEEKNGLRMRFVLNAVPLEKWVEKQERLNRFFVKGLESE FIMDDNKKEFDFILFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021275 [H]
Pfam domain/function: PF11016 DUF2854 [H]
EC number: NA
Molecular weight: Translated: 20381; Mature: 20381
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLSPGNLIVTAGGILAFVGMTAYFTDSVNLSVPTFFYGVPIFLIGLGLKTSEIPPVE CCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH LFDKTNFATNKFNRPKELTALVKDVTRWRYGIKAHLESSLESLNLWDEDNPPQLKEIEEI EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH TKEEKNGLRMRFVLNAVPLEKWVEKQERLNRFFVKGLESEFIMDDNKKEFDFILFY HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEC >Mature Secondary Structure MKKYLSPGNLIVTAGGILAFVGMTAYFTDSVNLSVPTFFYGVPIFLIGLGLKTSEIPPVE CCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH LFDKTNFATNKFNRPKELTALVKDVTRWRYGIKAHLESSLESLNLWDEDNPPQLKEIEEI EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH TKEEKNGLRMRFVLNAVPLEKWVEKQERLNRFFVKGLESEFIMDDNKKEFDFILFY HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]