Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is thiP [H]
Identifier: 123968082
GI number: 123968082
Start: 473445
End: 474983
Strand: Reverse
Name: thiP [H]
Synonym: A9601_05451
Alternate gene names: 123968082
Gene position: 474983-473445 (Counterclockwise)
Preceding gene: 123968083
Following gene: 123968077
Centisome position: 28.44
GC content: 32.55
Gene sequence:
>1539_bases TTGAAAATACTTATTAAAGGATTTAAAAAAGCATTAACCGAATTAAAACTTTTTTATTTTACTTCGTTTATTGTCGCATT TTTAGTAATCATTCCAATTTCCAATTTTCTTCTTGAAGGAGTTCAATATGTTGTAAGTGGTAATTTTTCATTAGGTATTG CTGGGGCAGAAGAGATATTAGAAACTTTAAAAGTTTTAGTACTAACAAGTTTTTTTGGAGGAGGATTAGGCACTTTAAAT GGATGGTTACTTTCAAATTGTGATTTTAAGTTCAGAAAAGTTCTCCGTATTTGTCAACTCATTCCACTAGCCGCCCCAGC ATACCTAATGACAGCTGTTTTGCAGGATTTAGGAAGTATTTTTGGGTATCAAGTAACCGGTTTATGGTGGGGCGTATTAA TACTTTCAATTTCTACTTATCCATATGTATTCATTCTTGCTAACGAAAGTTTTAATAAATTTGGAGTTAATCAAATCAAT GCTAGTAGAGGACTAGGAGTTGGGCCATGGAGGAGCTTCTTTAAAATCGCTTTTCCAATGGCGTTACCAGCACTAATAAC AGGGATAAGTTTAATGTGTATGGAAGTAATGAATGAGTTAGGTACATTTGCTTTATTAAATATTCCAAGTATTTCTACAG GTATAGCCGAAAATTGGATAATTGAGGGTAATCCAAAAAGTGCTATTGGACTATCTTTGGTAGCTTTATTAATAATTTTT ACTTTAATTATTTTTGAAAAAATCTCGCGAAGAAAATCAAAGAGGTGGAGTGAAAATCCTGCATCAAAAGATTCTCAAGG GTGGGAATTAAAAAAAACAAGAGCTTTTTTAGCAATAACAATATCTTTATTCCCTCCAATTTTCTCTTTTGGAATTCCAT GTTTTTGGGTTCTGCTCAATATCGATCAAATTCAAAAAGGGTTATCGATAGAATTACTTACCCTATCATTCAGGACCATA AGTCTAGGATTATTTACAGCATTAATAACGATGTTATTCTCTTTAATAATTTCCTTAGCAAGACGTCCGAATAAAAGCTT ATTACTAGGACTTATAACAAACCTTGCGGGAATAGGTTACGCAATTCCGGGTACTGTATTAGCTTTGTCTTTAATAAGCA TTTCTTCTTCAAAATTCAATTTCATTGCTATTTGCTTGCTGATTTGGGGTTATCTTGTTCGATTTTTAACTATTTCTAAG GGTTCTATTGATTCAAGTCTTGAGAGAATTTCTCCTAGTATTGATGAAGCTGCACTTGGACTAGGAGAGAATTGGCCAGG AATCATCAAAAGAATTCATCTACCTCTTCTTCAAGGACCAATATTTGTAGGATCACTTTTAGTTTTTGTAGACACGATAA AAGAATTACCCATAACTTTTATTTTGAGACCATTTGATTTTGATACATTATCTGTGAGGATATATCAATATGCTGGAGAT GAAAGAATGGTAGAGGCGATATTACCAGCCATTTTTATCATGACTTTAGGCCTTATTGCATCAATTACATTGATACCAAG CTTAGAGAAAAAAAACTAA
Upstream 100 bases:
>100_bases TATTAATTGGGAAAAACTTAGATCACCAAACTATTAAAAATCAACTGTCATCATGTAGATTTAATTCAGATTAGAGTTCA TATTAGGATTTAATTATTTT
Downstream 100 bases:
>100_bases ATTCTTTTAGAAAATTTTCTTATTAAGAAAGGTAGGCTTAAGAACAAATCTGCCGAGGTAGATATAACCCTATAATAAAC TAAGCTAATAAGAATTACAT
Product: putative iron ABC transporter
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MKILIKGFKKALTELKLFYFTSFIVAFLVIIPISNFLLEGVQYVVSGNFSLGIAGAEEILETLKVLVLTSFFGGGLGTLN GWLLSNCDFKFRKVLRICQLIPLAAPAYLMTAVLQDLGSIFGYQVTGLWWGVLILSISTYPYVFILANESFNKFGVNQIN ASRGLGVGPWRSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPSISTGIAENWIIEGNPKSAIGLSLVALLIIF TLIIFEKISRRKSKRWSENPASKDSQGWELKKTRAFLAITISLFPPIFSFGIPCFWVLLNIDQIQKGLSIELLTLSFRTI SLGLFTALITMLFSLIISLARRPNKSLLLGLITNLAGIGYAIPGTVLALSLISISSSKFNFIAICLLIWGYLVRFLTISK GSIDSSLERISPSIDEAALGLGENWPGIIKRIHLPLLQGPIFVGSLLVFVDTIKELPITFILRPFDFDTLSVRIYQYAGD ERMVEAILPAIFIMTLGLIASITLIPSLEKKN
Sequences:
>Translated_512_residues MKILIKGFKKALTELKLFYFTSFIVAFLVIIPISNFLLEGVQYVVSGNFSLGIAGAEEILETLKVLVLTSFFGGGLGTLN GWLLSNCDFKFRKVLRICQLIPLAAPAYLMTAVLQDLGSIFGYQVTGLWWGVLILSISTYPYVFILANESFNKFGVNQIN ASRGLGVGPWRSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPSISTGIAENWIIEGNPKSAIGLSLVALLIIF TLIIFEKISRRKSKRWSENPASKDSQGWELKKTRAFLAITISLFPPIFSFGIPCFWVLLNIDQIQKGLSIELLTLSFRTI SLGLFTALITMLFSLIISLARRPNKSLLLGLITNLAGIGYAIPGTVLALSLISISSSKFNFIAICLLIWGYLVRFLTISK GSIDSSLERISPSIDEAALGLGENWPGIIKRIHLPLLQGPIFVGSLLVFVDTIKELPITFILRPFDFDTLSVRIYQYAGD ERMVEAILPAIFIMTLGLIASITLIPSLEKKN >Mature_512_residues MKILIKGFKKALTELKLFYFTSFIVAFLVIIPISNFLLEGVQYVVSGNFSLGIAGAEEILETLKVLVLTSFFGGGLGTLN GWLLSNCDFKFRKVLRICQLIPLAAPAYLMTAVLQDLGSIFGYQVTGLWWGVLILSISTYPYVFILANESFNKFGVNQIN ASRGLGVGPWRSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPSISTGIAENWIIEGNPKSAIGLSLVALLIIF TLIIFEKISRRKSKRWSENPASKDSQGWELKKTRAFLAITISLFPPIFSFGIPCFWVLLNIDQIQKGLSIELLTLSFRTI SLGLFTALITMLFSLIISLARRPNKSLLLGLITNLAGIGYAIPGTVLALSLISISSSKFNFIAICLLIWGYLVRFLTISK GSIDSSLERISPSIDEAALGLGENWPGIIKRIHLPLLQGPIFVGSLLVFVDTIKELPITFILRPFDFDTLSVRIYQYAGD ERMVEAILPAIFIMTLGLIASITLIPSLEKKN
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56461; Mature: 56461
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIKGFKKALTELKLFYFTSFIVAFLVIIPISNFLLEGVQYVVSGNFSLGIAGAEEIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHH ETLKVLVLTSFFGGGLGTLNGWLLSNCDFKFRKVLRICQLIPLAAPAYLMTAVLQDLGSI HHHHHHHHHHHHCCCCHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FGYQVTGLWWGVLILSISTYPYVFILANESFNKFGVNQINASRGLGVGPWRSFFKIAFPM HCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALPALITGISLMCMEVMNELGTFALLNIPSISTGIAENWIIEGNPKSAIGLSLVALLIIF HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH TLIIFEKISRRKSKRWSENPASKDSQGWELKKTRAFLAITISLFPPIFSFGIPCFWVLLN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHCHHHHHHHHH IDQIQKGLSIELLTLSFRTISLGLFTALITMLFSLIISLARRPNKSLLLGLITNLAGIGY HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC AIPGTVLALSLISISSSKFNFIAICLLIWGYLVRFLTISKGSIDSSLERISPSIDEAALG CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHC LGENWPGIIKRIHLPLLQGPIFVGSLLVFVDTIKELPITFILRPFDFDTLSVRIYQYAGD CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCC ERMVEAILPAIFIMTLGLIASITLIPSLEKKN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKILIKGFKKALTELKLFYFTSFIVAFLVIIPISNFLLEGVQYVVSGNFSLGIAGAEEIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHH ETLKVLVLTSFFGGGLGTLNGWLLSNCDFKFRKVLRICQLIPLAAPAYLMTAVLQDLGSI HHHHHHHHHHHHCCCCHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FGYQVTGLWWGVLILSISTYPYVFILANESFNKFGVNQINASRGLGVGPWRSFFKIAFPM HCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALPALITGISLMCMEVMNELGTFALLNIPSISTGIAENWIIEGNPKSAIGLSLVALLIIF HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH TLIIFEKISRRKSKRWSENPASKDSQGWELKKTRAFLAITISLFPPIFSFGIPCFWVLLN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHCHHHHHHHHH IDQIQKGLSIELLTLSFRTISLGLFTALITMLFSLIISLARRPNKSLLLGLITNLAGIGY HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC AIPGTVLALSLISISSSKFNFIAICLLIWGYLVRFLTISKGSIDSSLERISPSIDEAALG CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHC LGENWPGIIKRIHLPLLQGPIFVGSLLVFVDTIKELPITFILRPFDFDTLSVRIYQYAGD CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCC ERMVEAILPAIFIMTLGLIASITLIPSLEKKN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]