Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123967963
Identifier: 123967963
GI number: 123967963
Start: 365384
End: 365572
Strand: Reverse
Name: 123967963
Synonym: A9601_04261
Alternate gene names: NA
Gene position: 365572-365384 (Counterclockwise)
Preceding gene: 123967970
Following gene: 123967961
Centisome position: 21.89
GC content: 37.57
Gene sequence:
>189_bases ATGTCACTATCGTCATACCGCATGCATAAAATTTATCTTGCAGCGATCATGAATTATGGTCTTGGTTCTGATGATCCAGA GGAGTTGGCCTATTACAACAAGCTAAGAAAAGAAATGAATGAGATAGAGAAAGATGCCGTTAAAAAAGGAATACCTCTTA CTTGGGATATTCCCGATGGAATGGATTAA
Upstream 100 bases:
>100_bases TATTATGAGGGGGTTGCGCAATTGACTGGTATGACAGAGATATCAGAGGTCAGCATTTTACCTGAAATTCGGATATATTT AACAGAGATTGTCTCCAGTA
Downstream 100 bases:
>100_bases TGAATCTGAATACTTTTTTATTAATTGATGGGAGTCTGATGCTTATTGGTCTACCTTTGCTGATGATTCTGAAAGGCAAA AAACAGACTCCCTAAGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSLSSYRMHKIYLAAIMNYGLGSDDPEELAYYNKLRKEMNEIEKDAVKKGIPLTWDIPDGMD
Sequences:
>Translated_62_residues MSLSSYRMHKIYLAAIMNYGLGSDDPEELAYYNKLRKEMNEIEKDAVKKGIPLTWDIPDGMD >Mature_61_residues SLSSYRMHKIYLAAIMNYGLGSDDPEELAYYNKLRKEMNEIEKDAVKKGIPLTWDIPDGMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7170; Mature: 7039
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSYRMHKIYLAAIMNYGLGSDDPEELAYYNKLRKEMNEIEKDAVKKGIPLTWDIPDG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC MD CC >Mature Secondary Structure SLSSYRMHKIYLAAIMNYGLGSDDPEELAYYNKLRKEMNEIEKDAVKKGIPLTWDIPDG CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC MD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA