Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967929

Identifier: 123967929

GI number: 123967929

Start: 349299

End: 349472

Strand: Reverse

Name: 123967929

Synonym: A9601_03921

Alternate gene names: NA

Gene position: 349472-349299 (Counterclockwise)

Preceding gene: 123967930

Following gene: 123967926

Centisome position: 20.93

GC content: 35.06

Gene sequence:

>174_bases
ATGTCTGAAAGATTTGAATGGGACGATACCAATAGTTCAGGTATATGGTGGAGTACTAATGTAAGTATTAGAGACGAGTG
CATTTTTCTTAAAGAAGATACTCAATGCGAAGATTCTGATATCGTCGAACTTCTGAGGAGTATTGCACAAAATATTGAAG
ATAATGGCCTTTAA

Upstream 100 bases:

>100_bases
CTTTTAATGTATAGGAAAGTTTTGTAAATTTTGAAATTCAATATATAAATCCACGATGAAGTAATGCAAGCTTTAGTGTA
TTTGTTAGATTTTATTAATT

Downstream 100 bases:

>100_bases
TTTTTGAAGAAATATTCCCTCTTTTAGAGATTTTGAATTCCTTTTACAGCTTTTATTAATTCGATACTAATGCCTTCCTC
ACTCATTGAATGACCTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MSERFEWDDTNSSGIWWSTNVSIRDECIFLKEDTQCEDSDIVELLRSIAQNIEDNGL

Sequences:

>Translated_57_residues
MSERFEWDDTNSSGIWWSTNVSIRDECIFLKEDTQCEDSDIVELLRSIAQNIEDNGL
>Mature_56_residues
SERFEWDDTNSSGIWWSTNVSIRDECIFLKEDTQCEDSDIVELLRSIAQNIEDNGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6655; Mature: 6524

Theoretical pI: Translated: 3.67; Mature: 3.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERFEWDDTNSSGIWWSTNVSIRDECIFLKEDTQCEDSDIVELLRSIAQNIEDNGL
CCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SERFEWDDTNSSGIWWSTNVSIRDECIFLKEDTQCEDSDIVELLRSIAQNIEDNGL
CCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA