Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123967926
Identifier: 123967926
GI number: 123967926
Start: 345345
End: 346178
Strand: Reverse
Name: 123967926
Synonym: A9601_03891
Alternate gene names: NA
Gene position: 346178-345345 (Counterclockwise)
Preceding gene: 123967929
Following gene: 123967925
Centisome position: 20.73
GC content: 24.58
Gene sequence:
>834_bases ATGCTTTTTTCTAGAATGGTTGGGGGATTAGGTAATCAATTATTTCAAACCGCAGCATTTTTGAAATATCGGCGTATCAA AGAAAAAGTAATAATTTCCTTTCTAGGAGATATTCACATCCCAAAAAGAGAAAATTGTCTGGATTATATTTTTGAAACTC CTGATTGGCTTTATTATGATAATTCTAGAAAAATAAATTTATTTACAAGATTTTTAGCCAGAAGTTCTGCAGGACTAAGG TTTGGTAGTTATGTGCCATATATAGGTGTAAATGATAGGAACTTTTATTTAAAAAATTCTTATTTTTTTAATAAAAAAAT ATTATTTTTCGATGGTTATTTCATCCATAACTGGAAGTATGAACAAATAAATGAATTATTTAGTCAATTAAAATTAAGAC CTATTTACTTGAATAGAGAGAATATTAAAATTTGTAATGAAAATGTAATTATTCATGTTAGGGGAGGTGACTTCCTCAAA ATAAAACACCTAAATATTTGCGATAATTACTATTATAAAAAAGCAATTGAATATTCACTTAGAAAGGGATTTAATACTTT CAAGGTGATTTCTGAAGATCGACAATATGCTAAAGAAATTATAAAAGAAATGAAAAAATATTTTATAGATTTAAAAATTT CAATTCTTAAATCAAATTCTATAAAAAATGATTTTAATATTATTAGATCTTCCAATTTAGCAATATTGAGCAATAGTACT TTTTCTTGGTGGGCATCTTTTTTATCAAATTCCAAAAAAGAATTCTTAGTTCCCTCTAATTTCTCTTTAAAAGAAAAAAG AATTATTCTTCCAAATGAAAATGTAATTGTTTAA
Upstream 100 bases:
>100_bases CCAATTAAAATTTAAATATTATTAAGTTAAGATTATATACTTAATACAAAATCAGAACTATCTAAAGAATCTTTTTCTTA ACTTTATATTTTTTAAAAAA
Downstream 100 bases:
>100_bases TCAATATATGTAAGTACATATTCAAACAATCAAATTTTGCATAAAATTAAGCTATATGATTTTTTTAATAAATTAACAAA GACTCGATTTTCATAATGAA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MLFSRMVGGLGNQLFQTAAFLKYRRIKEKVIISFLGDIHIPKRENCLDYIFETPDWLYYDNSRKINLFTRFLARSSAGLR FGSYVPYIGVNDRNFYLKNSYFFNKKILFFDGYFIHNWKYEQINELFSQLKLRPIYLNRENIKICNENVIIHVRGGDFLK IKHLNICDNYYYKKAIEYSLRKGFNTFKVISEDRQYAKEIIKEMKKYFIDLKISILKSNSIKNDFNIIRSSNLAILSNST FSWWASFLSNSKKEFLVPSNFSLKEKRIILPNENVIV
Sequences:
>Translated_277_residues MLFSRMVGGLGNQLFQTAAFLKYRRIKEKVIISFLGDIHIPKRENCLDYIFETPDWLYYDNSRKINLFTRFLARSSAGLR FGSYVPYIGVNDRNFYLKNSYFFNKKILFFDGYFIHNWKYEQINELFSQLKLRPIYLNRENIKICNENVIIHVRGGDFLK IKHLNICDNYYYKKAIEYSLRKGFNTFKVISEDRQYAKEIIKEMKKYFIDLKISILKSNSIKNDFNIIRSSNLAILSNST FSWWASFLSNSKKEFLVPSNFSLKEKRIILPNENVIV >Mature_277_residues MLFSRMVGGLGNQLFQTAAFLKYRRIKEKVIISFLGDIHIPKRENCLDYIFETPDWLYYDNSRKINLFTRFLARSSAGLR FGSYVPYIGVNDRNFYLKNSYFFNKKILFFDGYFIHNWKYEQINELFSQLKLRPIYLNRENIKICNENVIIHVRGGDFLK IKHLNICDNYYYKKAIEYSLRKGFNTFKVISEDRQYAKEIIKEMKKYFIDLKISILKSNSIKNDFNIIRSSNLAILSNST FSWWASFLSNSKKEFLVPSNFSLKEKRIILPNENVIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33045; Mature: 33045
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSRMVGGLGNQLFQTAAFLKYRRIKEKVIISFLGDIHIPKRENCLDYIFETPDWLYYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEC NSRKINLFTRFLARSSAGLRFGSYVPYIGVNDRNFYLKNSYFFNKKILFFDGYFIHNWKY CCCEEHHHHHHHHHCCCCCEECCCCCEEECCCCCEEEECCEEEEEEEEEEECEEEECCCH EQINELFSQLKLRPIYLNRENIKICNENVIIHVRGGDFLKIKHLNICDNYYYKKAIEYSL HHHHHHHHHCCCEEEEEECCCEEEECCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHH RKGFNTFKVISEDRQYAKEIIKEMKKYFIDLKISILKSNSIKNDFNIIRSSNLAILSNST HCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHEECCCEEEEECCC FSWWASFLSNSKKEFLVPSNFSLKEKRIILPNENVIV HHHHHHHHCCCCCEEECCCCCCCCCCEEECCCCCEEC >Mature Secondary Structure MLFSRMVGGLGNQLFQTAAFLKYRRIKEKVIISFLGDIHIPKRENCLDYIFETPDWLYYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEC NSRKINLFTRFLARSSAGLRFGSYVPYIGVNDRNFYLKNSYFFNKKILFFDGYFIHNWKY CCCEEHHHHHHHHHCCCCCEECCCCCEEECCCCCEEEECCEEEEEEEEEEECEEEECCCH EQINELFSQLKLRPIYLNRENIKICNENVIIHVRGGDFLKIKHLNICDNYYYKKAIEYSL HHHHHHHHHCCCEEEEEECCCEEEECCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHH RKGFNTFKVISEDRQYAKEIIKEMKKYFIDLKISILKSNSIKNDFNIIRSSNLAILSNST HCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHEECCCEEEEECCC FSWWASFLSNSKKEFLVPSNFSLKEKRIILPNENVIV HHHHHHHHCCCCCEEECCCCCCCCCCEEECCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA