Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is 123966015
Identifier: 123966015
GI number: 123966015
Start: 705371
End: 706030
Strand: Direct
Name: 123966015
Synonym: P9515_07801
Alternate gene names: NA
Gene position: 705371-706030 (Clockwise)
Preceding gene: 123966014
Following gene: 123966016
Centisome position: 41.39
GC content: 30.61
Gene sequence:
>660_bases ATGAGAATAGCAATTACTGGAGCTTCCGGTAAAACAGGTTACAGAATAGTCGAAGAAGCTCAAAAAAAAGGATTTAAAGT AAAGAAGATAGTTAGAAAAAATTCAAAAGTTATAGACGACTCTAAAAATACAGAAACGTTAAGATTTTCATTAAATAATA AAGATGCTTTAGATAAAGCTTTAGAAAATGTAGATGCATTAATAATTGCGACTGGAGCAAGAGCCTCAGTAGATTTAACT GGTCCTGCGAGGGTTGACGCTCTAGGTGTCTACAGACAATTGCAGAGTTGTAAAAGAGTTGGTCTTAAGAGAGTTGTATT AGTTAGCTCTTTATGTACTGGTAAATTGTTTCACCCACTAAACTTATTTGGATTAATTCTTATCTGGAAAAAGATAGGTG AGAATTTTCTAAGAAATCCATTTTTTGAATGGACAATAATTAGACCTGGTGGATTAAAGGAAAGCGAAATAATAGATTTA GAAAATATCGATTATACAAATGAGGATACTCAATTCAAAGGCTCTATTCCTAGAAGACTTGTAGCAAAATGTTGTATTGA CTCACTAAGTAACAAACAATCTATAAATAAAATAATTGAAGTAACAAGTTCCAGTAAGAATAAAAAAATTTCTTTTAAAA AAGCTATGCAAACTATCTAA
Upstream 100 bases:
>100_bases AATGCTTAATGTGCAGAACATTATATCCTAATAGAAAAAAGAAATTTGTATGTAAAAAGCCTTAAAATTTTATTATACTA ACCATGTTTGTTTTAAAATT
Downstream 100 bases:
>100_bases AAGATGTAAAAATAAACATAAACTATGAAGATAAGCCCAAAGATTGATGCATTGCAATTAATGCTCACTGACTTACGAAC CAGAAATGAGCCCATAAGGC
Product: putative NADH-flavin reductase
Products: NA
Alternate protein names: NADH-Flavin Reductase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKALENVDALIIATGARASVDLT GPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDL ENIDYTNEDTQFKGSIPRRLVAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI
Sequences:
>Translated_219_residues MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKALENVDALIIATGARASVDLT GPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDL ENIDYTNEDTQFKGSIPRRLVAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI >Mature_219_residues MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKALENVDALIIATGARASVDLT GPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDL ENIDYTNEDTQFKGSIPRRLVAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24474; Mature: 24474
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKA CEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH LENVDALIIATGARASVDLTGPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPL HHCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHH NLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDLENIDYTNEDTQFKGSIPRRL HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH VAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHCC >Mature Secondary Structure MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKA CEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH LENVDALIIATGARASVDLTGPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPL HHCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHH NLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDLENIDYTNEDTQFKGSIPRRL HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH VAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA