Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966015

Identifier: 123966015

GI number: 123966015

Start: 705371

End: 706030

Strand: Direct

Name: 123966015

Synonym: P9515_07801

Alternate gene names: NA

Gene position: 705371-706030 (Clockwise)

Preceding gene: 123966014

Following gene: 123966016

Centisome position: 41.39

GC content: 30.61

Gene sequence:

>660_bases
ATGAGAATAGCAATTACTGGAGCTTCCGGTAAAACAGGTTACAGAATAGTCGAAGAAGCTCAAAAAAAAGGATTTAAAGT
AAAGAAGATAGTTAGAAAAAATTCAAAAGTTATAGACGACTCTAAAAATACAGAAACGTTAAGATTTTCATTAAATAATA
AAGATGCTTTAGATAAAGCTTTAGAAAATGTAGATGCATTAATAATTGCGACTGGAGCAAGAGCCTCAGTAGATTTAACT
GGTCCTGCGAGGGTTGACGCTCTAGGTGTCTACAGACAATTGCAGAGTTGTAAAAGAGTTGGTCTTAAGAGAGTTGTATT
AGTTAGCTCTTTATGTACTGGTAAATTGTTTCACCCACTAAACTTATTTGGATTAATTCTTATCTGGAAAAAGATAGGTG
AGAATTTTCTAAGAAATCCATTTTTTGAATGGACAATAATTAGACCTGGTGGATTAAAGGAAAGCGAAATAATAGATTTA
GAAAATATCGATTATACAAATGAGGATACTCAATTCAAAGGCTCTATTCCTAGAAGACTTGTAGCAAAATGTTGTATTGA
CTCACTAAGTAACAAACAATCTATAAATAAAATAATTGAAGTAACAAGTTCCAGTAAGAATAAAAAAATTTCTTTTAAAA
AAGCTATGCAAACTATCTAA

Upstream 100 bases:

>100_bases
AATGCTTAATGTGCAGAACATTATATCCTAATAGAAAAAAGAAATTTGTATGTAAAAAGCCTTAAAATTTTATTATACTA
ACCATGTTTGTTTTAAAATT

Downstream 100 bases:

>100_bases
AAGATGTAAAAATAAACATAAACTATGAAGATAAGCCCAAAGATTGATGCATTGCAATTAATGCTCACTGACTTACGAAC
CAGAAATGAGCCCATAAGGC

Product: putative NADH-flavin reductase

Products: NA

Alternate protein names: NADH-Flavin Reductase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKALENVDALIIATGARASVDLT
GPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDL
ENIDYTNEDTQFKGSIPRRLVAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI

Sequences:

>Translated_219_residues
MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKALENVDALIIATGARASVDLT
GPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDL
ENIDYTNEDTQFKGSIPRRLVAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI
>Mature_219_residues
MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKALENVDALIIATGARASVDLT
GPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDL
ENIDYTNEDTQFKGSIPRRLVAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24474; Mature: 24474

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKA
CEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH
LENVDALIIATGARASVDLTGPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPL
HHCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHH
NLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDLENIDYTNEDTQFKGSIPRRL
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH
VAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI
HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHCC
>Mature Secondary Structure
MRIAITGASGKTGYRIVEEAQKKGFKVKKIVRKNSKVIDDSKNTETLRFSLNNKDALDKA
CEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH
LENVDALIIATGARASVDLTGPARVDALGVYRQLQSCKRVGLKRVVLVSSLCTGKLFHPL
HHCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHH
NLFGLILIWKKIGENFLRNPFFEWTIIRPGGLKESEIIDLENIDYTNEDTQFKGSIPRRL
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH
VAKCCIDSLSNKQSINKIIEVTSSSKNKKISFKKAMQTI
HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA