Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is hisC2
Identifier: 121639688
GI number: 121639688
Start: 4189536
End: 4190597
Strand: Direct
Name: hisC2
Synonym: BCG_3833
Alternate gene names: 121639688
Gene position: 4189536-4190597 (Clockwise)
Preceding gene: 121639683
Following gene: 121639691
Centisome position: 95.77
GC content: 67.61
Gene sequence:
>1062_bases GTGACCGCCCGCCTGCGACCCGAGCTGGCTGGGCTGCCGGTTTATGTGCCCGGCAAAACGGTGCCGGGCGCCATCAAGCT GGCCAGCAACGAAACCGTGTTCGGCCCGCTGCCCAGCGTCCGTGCCGCCATCGACCGGGCTACCGACACGGTCAACCGCT ACCCCGACAACGGCTGCGTGCAGCTCAAGGCCGCGCTGGCCCGGCATCTTGGCCCGGACTTCGCTCCCGAGCACGTCGCC GTCGGTTGCGGCTCGGTCAGCCTCTGCCAGCAACTCGTTCAGGTCACCGCCTCGGTTGGTGACGAAGTGGTCTTCGGCTG GCGCAGCTTTGAGCTCTATCCACCACAGGTCCGGGTCGCCGGCGCTATCCCCATCCAGGTGCCGTTGACCGACCACACGT TCGACCTCTACGCCATGCTCGCCGCGGTCACCGACCGCACCCGGCTGATCTTCGTGTGCAACCCCAACAATCCGACCTCC ACCGTCGTCGGTCCGGACGCGCTGGCCCGCTTCGTCGAGGCGGTTCCGGCGCACATCCTGATCGCCATCGACGAGGCGTA TGTGGAGTACATCCGGGACGGCATGCGGCCCGACAGCTTAGGCCTGGTTCGCGCACACAACAATGTCGTTGTGCTGCGTA CGTTTTCGAAAGCGTACGGCCTGGCGGGGTTGCGGATCGGCTACGCGATCGGCCACCCCGACGTCATAACCGCGCTGGAC AAGGTCTACGTGCCATTTACCGTGTCGAGTATCGGGCAGGCCGCGGCCATCGCGTCCCTGGACGCCGCCGACGAGCTGCT GGCCCGTACCGACACCGTGGTTGCCGAGCGCGCCCGCGTCAGCGCCGAGTTGCGTGCTGCCGGGTTCACGCTGCCGCCAT CGCAGGCCAACTTTGTCTGGCTTCCGCTGGGATCCCGCACCCAAGACTTCGTGGAGCAGGCCGCCGATGCACGCATCGTG GTCCGCCCGTACGGCACGGATGGCGTTCGGGTCACCGTCGCCGCACCAGAGGAGAACGACGCGTTCCTGCGGTTCGCCCG CCGCTGGCGGAGCGACCAATGA
Upstream 100 bases:
>100_bases TTCGGCCGCTCTGGCACGCCTCCATGGACTTCCCGAGAGTACCCGGACTCCCCGAGCCGCCGGAGGCCTAGCGTACACAG CCGCCACATATGCTGTCGAC
Downstream 100 bases:
>100_bases GCGTGGCCCGTAAGAAAATTCGACGCCCACGCTCGAGCGTCACGGCTATCTGGCCGGGTTGCGGCCGGTGAACGCGATCA GCCGCTCCAGCGCCCCGCCA
Product: putative aminotransferase
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLGPDFAPEHVA VGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLTDHTFDLYAMLAAVTDRTRLIFVCNPNNPTS TVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALD KVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIV VRPYGTDGVRVTVAAPEENDAFLRFARRWRSDQ
Sequences:
>Translated_353_residues MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLGPDFAPEHVA VGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLTDHTFDLYAMLAAVTDRTRLIFVCNPNNPTS TVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALD KVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIV VRPYGTDGVRVTVAAPEENDAFLRFARRWRSDQ >Mature_352_residues TARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLGPDFAPEHVAV GCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLTDHTFDLYAMLAAVTDRTRLIFVCNPNNPTST VVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDK VYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIVV RPYGTDGVRVTVAAPEENDAFLRFARRWRSDQ
Specific function: May catalyze the transamination reaction in phenylalanine biosynthesis
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family
Homologues:
Organism=Escherichia coli, GI1788332, Length=307, Percent_Identity=27.3615635179153, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786816, Length=264, Percent_Identity=24.6212121212121, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788722, Length=267, Percent_Identity=26.2172284644195, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788627, Length=195, Percent_Identity=27.6923076923077, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71994472, Length=171, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71994476, Length=171, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=379, Percent_Identity=22.9551451187335, Blast_Score=97, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PATR_MYCBO (Q7TVQ0)
Other databases:
- EMBL: BX248347 - RefSeq: NP_857437.1 - ProteinModelPortal: Q7TVQ0 - SMR: Q7TVQ0 - EnsemblBacteria: EBMYCT00000014823 - GeneID: 1093367 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb3800 - GeneTree: EBGT00070000031717 - HOGENOM: HBG646350 - OMA: ENTLIVI - ProtClustDB: PRK03321 - BioCyc: MBOV233413:MB3800-MONOMER - HAMAP: MF_01513 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: 2.6.1.9
Molecular weight: Translated: 38010; Mature: 37879
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCV CCCCCCCHHCCCCEEECCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCHH QLKAALARHLGPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVA HHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEE GAIPIQVPLTDHTFDLYAMLAAVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHIL EEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEE IAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALD EEEHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECHHHHCCCCEEEEEEECCCHHHHHHH KVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVW HEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE LPLGSRTQDFVEQAADARIVVRPYGTDGVRVTVAAPEENDAFLRFARRWRSDQ EECCCCHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCV CCCCCCHHCCCCEEECCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCHH QLKAALARHLGPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVA HHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEE GAIPIQVPLTDHTFDLYAMLAAVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHIL EEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEE IAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALD EEEHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECHHHHCCCCEEEEEEECCCHHHHHHH KVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVW HEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE LPLGSRTQDFVEQAADARIVVRPYGTDGVRVTVAAPEENDAFLRFARRWRSDQ EECCCCHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-histidinol phosphate; 2-oxoglutarate
Specific reaction: L-histidinol phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972