Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639582
Identifier: 121639582
GI number: 121639582
Start: 4083940
End: 4084458
Strand: Direct
Name: 121639582
Synonym: BCG_3727
Alternate gene names: NA
Gene position: 4083940-4084458 (Clockwise)
Preceding gene: 121639580
Following gene: 121639583
Centisome position: 93.36
GC content: 61.08
Gene sequence:
>519_bases GTGAGCAAGATCGATCGCAAGAACGGTGTGCCCAGCACGCTGACCACGATTCCGTTGGCCGACCCGCACGCCGGACCTGC TGAGCCGTCGATCGGTGACCTGATCAAAGACGCGACAACGCAGATGTCGACGCTGGTCCGAGCCGAGGTCGAGCTGGCCC GCGCCGAGATCACCCGGGACGTCAAGAAGGGACTGACCGGCAGTGTTTTCTTCATCTCCTCGCTGGTGGTCGGGTTCTAC TCCACCTTCTTTTTCTTCTTTTTCGTCGCCGAACTGCTCGATACCTGGATCTGGCGCTGGGTGGCTTTCTTGCTCGTGTT CGCCATAATGGTCGTGGTCACCGCCGTGTTGGCCCTCTTGGGTTTCCTGAAAGTCCGGCGCATCCGGGGACCGCGGCAGA CCATTGCGTCGGTCAAAGAGACGCGCACCGCACTTACCCCGGGCCATGACAAAACCCCTGTGACACCAAAACCCGTCACA TCTGATCGCGCGACGCCGGTTGACCCCTCGGGTTGGTAG
Upstream 100 bases:
>100_bases TCGAACCGAGCTCGGCGACGATGCGGGCCGGATGACGGCCTAGGGTGGGGTACCGCCGCTGGCGAGGGCGAGCCGAGCAA TCGAATCGAGAGGACCGTCT
Downstream 100 bases:
>100_bases ATGGCGGCACCAGATCCGTCGATGACCCGCATCGCCGGGCCATGGCGTCATCTGGACGTGCACGCCAACGGCATCCGATT CCACGTCGTCGAGGCTGTGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Conserved Transmembrane Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSKIDRKNGVPSTLTTIPLADPHAGPAEPSIGDLIKDATTQMSTLVRAEVELARAEITRDVKKGLTGSVFFISSLVVGFY STFFFFFFVAELLDTWIWRWVAFLLVFAIMVVVTAVLALLGFLKVRRIRGPRQTIASVKETRTALTPGHDKTPVTPKPVT SDRATPVDPSGW
Sequences:
>Translated_172_residues MSKIDRKNGVPSTLTTIPLADPHAGPAEPSIGDLIKDATTQMSTLVRAEVELARAEITRDVKKGLTGSVFFISSLVVGFY STFFFFFFVAELLDTWIWRWVAFLLVFAIMVVVTAVLALLGFLKVRRIRGPRQTIASVKETRTALTPGHDKTPVTPKPVT SDRATPVDPSGW >Mature_171_residues SKIDRKNGVPSTLTTIPLADPHAGPAEPSIGDLIKDATTQMSTLVRAEVELARAEITRDVKKGLTGSVFFISSLVVGFYS TFFFFFFVAELLDTWIWRWVAFLLVFAIMVVVTAVLALLGFLKVRRIRGPRQTIASVKETRTALTPGHDKTPVTPKPVTS DRATPVDPSGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18919; Mature: 18788
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIDRKNGVPSTLTTIPLADPHAGPAEPSIGDLIKDATTQMSTLVRAEVELARAEITRD CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKKGLTGSVFFISSLVVGFYSTFFFFFFVAELLDTWIWRWVAFLLVFAIMVVVTAVLALL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLKVRRIRGPRQTIASVKETRTALTPGHDKTPVTPKPVTSDRATPVDPSGW HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKIDRKNGVPSTLTTIPLADPHAGPAEPSIGDLIKDATTQMSTLVRAEVELARAEITRD CCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKKGLTGSVFFISSLVVGFYSTFFFFFFVAELLDTWIWRWVAFLLVFAIMVVVTAVLALL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLKVRRIRGPRQTIASVKETRTALTPGHDKTPVTPKPVTSDRATPVDPSGW HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA