Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639320
Identifier: 121639320
GI number: 121639320
Start: 3797983
End: 3798609
Strand: Direct
Name: 121639320
Synonym: BCG_3465
Alternate gene names: NA
Gene position: 3797983-3798609 (Clockwise)
Preceding gene: 121639317
Following gene: 121639324
Centisome position: 86.82
GC content: 64.27
Gene sequence:
>627_bases GTGCAATCGCGTAAAACCACCTCGGTACTGGCGGCTGCCCTGCTGTTTTGCGGCCTGTTAGGCCCAGGGACGGCCCCACC GGCCACCGGTGGCGGGCCTGCCTGCCGGCCGGCAGAGCTCTTCGCCACCGACAACACCACCGATGGGTTCGAGCTACCGG CCGTTGCGACTATCGCACTAACCGGCACGGTGGTGACCGGATCGACCCTGGTCGACGGCGTGTTCTGGTCGAATGAGCGC CAGCAGATCGGCTACGAGCGCTCCCGTGAATTTCATCTGTGCGTTGTCGACGCGCCCACATTGCACAACGCCGCCGAGGC ACTGCACCGCCAGTTCAACCAAGAAGCGGTGCTGACCTTCGACTACTTGCCGCAGAATGCACCCGAGGCGGACGCGATCC TCATCACCGTGCCCGACATCGGCATCGCCCGCTTCCGCGATGCCTTCGCATCTGATTTGGCTGCACACCACCGATTACGG GGCGGATCTGTCACCACAGCCGACCACACCTTAATCCTGGTCGCCGGCAACGGCGATCTCGATGTCGCCCGCCGACTCGT CGAGGAGGCCGGCGGGGACTGGAACGCAACCACCATTGCCCATGGCAGGCGTGAATTCGTGAACTAG
Upstream 100 bases:
>100_bases GGCGAAGGCCACAGTCATGACCAGCCTCCTGTTCGAAAATATGTTCGAAGTCAGTAAACACCCGTCCTTGGAGTCCGTCA AGGTCATGAGAGGCTGCCTT
Downstream 100 bases:
>100_bases CTGATCAAGGGCGCTCCGCTGGCCACCCGAGCCGGGTTGGTCACATTAGTTAGTCACAGCAATCTCTGGGCCGGCGGGCA CAACGCGTATTCATCCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIALTGTVVTGSTLVDGVFWSNER QQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLR GGSVTTADHTLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFVN
Sequences:
>Translated_208_residues MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIALTGTVVTGSTLVDGVFWSNER QQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLR GGSVTTADHTLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFVN >Mature_208_residues MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIALTGTVVTGSTLVDGVFWSNER QQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLR GGSVTTADHTLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22090; Mature: 22090
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCEEEEEEE TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF EEEEEECCHHHHHEEECCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL ECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCH DVARRLVEEAGGDWNATTIAHGRREFVN HHHHHHHHHCCCCCCCCHHHCCHHHHCC >Mature Secondary Structure MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCEEEEEEE TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF EEEEEECCHHHHHEEECCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL ECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCH DVARRLVEEAGGDWNATTIAHGRREFVN HHHHHHHHHCCCCCCCCHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA