Click here to switch to the map view.

The map label for this gene is yhdE [C]

Identifier: 121639171

GI number: 121639171

Start: 3616627

End: 3617295

Strand: Direct

Name: yhdE [C]

Synonym: BCG_3311

Alternate gene names: 121639171

Gene position: 3616627-3617295 (Clockwise)

Preceding gene: 121639170

Following gene: 121639172

Centisome position: 82.67

GC content: 64.87

Gene sequence:

>669_bases
ATGACCCGGCTGGTGCTCGGGTCCGCCTCCCCTGGCCGGCTCAAAGTCCTTCGTGATGCCGGCATTGAGCCGCTGGTCAT
CGCCTCGCACGTCGACGAGGATGTCGTCATCGCGGCGCTGGGGCCGGACGCGGTCCCGAGCGATGTGGTGTGCGTACTGG
CCGCGGCAAAGGCCGCGCAGGTCGCGACCACGCTGACCGGAACGCAACGCATTGTGGCCGCGGATTGCGTTGTCGTTGCC
TGTGATTCGATGCTCTACATCGAAGGCAGGCTACTCGGCAAGCCAGCGTCAATCGACGAGGCGCGCGAGCAGTGGCGGTC
GATGGCGGGCCGGGCCGGCCAACTCTATACGGGCCACGGTGTTATCCGGTTGCAGGACAACAAAACCGTGTACCGTTCTG
CTGAAACAGCAATAACCACAGTATATTTCGGAACACCTTCGGCCTCCGATCTGGAGGCTTACCTGGCCAGTGGGGAGTCG
CTGCGGGTCGCGGGTGGATTCACCCTGGACGGTCTGGGCGGCTGGTTCATCGACGGCGTGCAGGGCAATCCGTCGAATGT
GATCGGCTTGAGCCTGCCGTTGCTGCGGTCGCTCGTGCAGCGATGCGGGCTGTCCGTCGCCGCACTGTGGGCAGGAAATG
CGGGCGGCCCAGCGCACAAGCAGCAGTAG

Upstream 100 bases:

>100_bases
AACCCGAGCCCACCCGGTGGGGGCTGCCGGTCGACCAGTTGCGGTACCCCGTCTTCAGTTGGCAGCGCATCACACTGCAA
GAAATGACGCACATGCGCCG

Downstream 100 bases:

>100_bases
CTTCGGACTGGGCCAGGTCGCCAGCGGTAGGCTCGATGATGTGCCGCTTCCCGCAGACCCTAGCCCCACCTTGTCGGCCT
ACGCCCATCCCGAACGGCTC

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTRLVLGSASPGRLKVLRDAGIEPLVIASHVDEDVVIAALGPDAVPSDVVCVLAAAKAAQVATTLTGTQRIVAADCVVVA
CDSMLYIEGRLLGKPASIDEAREQWRSMAGRAGQLYTGHGVIRLQDNKTVYRSAETAITTVYFGTPSASDLEAYLASGES
LRVAGGFTLDGLGGWFIDGVQGNPSNVIGLSLPLLRSLVQRCGLSVAALWAGNAGGPAHKQQ

Sequences:

>Translated_222_residues
MTRLVLGSASPGRLKVLRDAGIEPLVIASHVDEDVVIAALGPDAVPSDVVCVLAAAKAAQVATTLTGTQRIVAADCVVVA
CDSMLYIEGRLLGKPASIDEAREQWRSMAGRAGQLYTGHGVIRLQDNKTVYRSAETAITTVYFGTPSASDLEAYLASGES
LRVAGGFTLDGLGGWFIDGVQGNPSNVIGLSLPLLRSLVQRCGLSVAALWAGNAGGPAHKQQ
>Mature_221_residues
TRLVLGSASPGRLKVLRDAGIEPLVIASHVDEDVVIAALGPDAVPSDVVCVLAAAKAAQVATTLTGTQRIVAADCVVVAC
DSMLYIEGRLLGKPASIDEAREQWRSMAGRAGQLYTGHGVIRLQDNKTVYRSAETAITTVYFGTPSASDLEAYLASGESL
RVAGGFTLDGLGGWFIDGVQGNPSNVIGLSLPLLRSLVQRCGLSVAALWAGNAGGPAHKQQ

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=193, Percent_Identity=31.6062176165803, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI291045183, Length=193, Percent_Identity=29.5336787564767, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1789646, Length=193, Percent_Identity=30.5699481865285, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081830, Length=204, Percent_Identity=26.9607843137255, Blast_Score=70, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI193202443, Length=195, Percent_Identity=27.6923076923077, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI78706856, Length=190, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 23027; Mature: 22895

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLVLGSASPGRLKVLRDAGIEPLVIASHVDEDVVIAALGPDAVPSDVVCVLAAAKAAQ
CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
VATTLTGTQRIVAADCVVVACDSMLYIEGRLLGKPASIDEAREQWRSMAGRAGQLYTGHG
HHHHHCCCCHHHHHHEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCE
VIRLQDNKTVYRSAETAITTVYFGTPSASDLEAYLASGESLRVAGGFTLDGLGGWFIDGV
EEEEECCCEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCEEECCCCCEEEECC
QGNPSNVIGLSLPLLRSLVQRCGLSVAALWAGNAGGPAHKQQ
CCCCCCEEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TRLVLGSASPGRLKVLRDAGIEPLVIASHVDEDVVIAALGPDAVPSDVVCVLAAAKAAQ
CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
VATTLTGTQRIVAADCVVVACDSMLYIEGRLLGKPASIDEAREQWRSMAGRAGQLYTGHG
HHHHHCCCCHHHHHHEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCE
VIRLQDNKTVYRSAETAITTVYFGTPSASDLEAYLASGESLRVAGGFTLDGLGGWFIDGV
EEEEECCCEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCEEECCCCCEEEECC
QGNPSNVIGLSLPLLRSLVQRCGLSVAALWAGNAGGPAHKQQ
CCCCCCEEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]