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The map label for this gene is rutD [H]

Identifier: 121639062

GI number: 121639062

Start: 3500638

End: 3501498

Strand: Direct

Name: rutD [H]

Synonym: BCG_3202

Alternate gene names: 121639062

Gene position: 3500638-3501498 (Clockwise)

Preceding gene: 121639059

Following gene: 121639063

Centisome position: 80.02

GC content: 62.6

Gene sequence:

>861_bases
GTGCCCCAGAGACAGGCCGGCGACATCGGCGCGACATACCAGGACGCGCCCACGAAGAGCATCAATGTGGGCGGAACGCG
TTTTGTCTACCGGCGGCTCGGTGCTGATGCCGGCGTGCCGGTGATCTTTCTGCACCACTTGGGCGCGGTCTTAGACAACT
GGGATCCACGGGTCGTCGACGGCATCGCCGCCAAGCATCCAGTGGTCACTTTCGACAACCGCGGTGTCGGCGCTTCGGAA
GGCCAGACGCCGGACACCGTGACCACCATGGCCGACGATGCGATCGCCTTTGTCCGTGCCCTGGGGTTCGATCAGGTTGA
TCTCCTTGGATTCTCGTTGGGCGGCTTCGTCGCGCAGGTGATCGCGCAGCAAGAACCGCAGCTCGTTCGCAAGATCATCC
TCGCGGGTACCGGACCGGCCGGTGGTGTCGGCATCGGCAAGGTTACTTTCGGGACGATCCGCGAGAGCATCAAGGCCACA
CTGACTTTCAGGGATCCCAAGGAGTTGCGGTTCTTCACGCGAACCGACAGCGGCAAATCGGCGGCGCGACAGTTCGTGAA
GCGGCTCAAGGAACGGAAGGACAATCGCGACAAATCGATTACAGTGCGCGCGTTCCGCTCCCAGCTCAAGGCCATCCATG
CATGGGGCACGCAAAAGCCTTCGGACTTGACGAGCATCGGCCATCCGGTCCTGATCGCAAACGGTGACGACGACACGATG
GTGCCCACCAGCAACTCGTTGGACCTCGCTGACCGGCTGCCCGACGCCACGCTGCGCATCTATCCCGACGCCGGCCACGG
CGGGATATTCCAGCACCACGCACAGTTTGTGGACGATGCCCTGCAGTTTCTCGAGTCGTGA

Upstream 100 bases:

>100_bases
TGCATCTCCGCAACCAAAGTACACCGATAAGTTTACGTGTCGCATTAACCGATGTACAGTGTCGGTTATAAGTACACCGA
TCAGTATACAAGGAGTCGGC

Downstream 100 bases:

>100_bases
AGCGATTTCGCATGACCACCAAAGCCACGCCCAGACCAGTTGGATTCGCCGCTCCTCCCCACCGTTTCGCGGTATCGGCA
GAGCGCACCCATGGATCTAT

Product: putative peroxidase (non-haem peroxidase)

Products: 2-oxopent-4-enoate; succinate [C]

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPQRQAGDIGATYQDAPTKSINVGGTRFVYRRLGADAGVPVIFLHHLGAVLDNWDPRVVDGIAAKHPVVTFDNRGVGASE
GQTPDTVTTMADDAIAFVRALGFDQVDLLGFSLGGFVAQVIAQQEPQLVRKIILAGTGPAGGVGIGKVTFGTIRESIKAT
LTFRDPKELRFFTRTDSGKSAARQFVKRLKERKDNRDKSITVRAFRSQLKAIHAWGTQKPSDLTSIGHPVLIANGDDDTM
VPTSNSLDLADRLPDATLRIYPDAGHGGIFQHHAQFVDDALQFLES

Sequences:

>Translated_286_residues
MPQRQAGDIGATYQDAPTKSINVGGTRFVYRRLGADAGVPVIFLHHLGAVLDNWDPRVVDGIAAKHPVVTFDNRGVGASE
GQTPDTVTTMADDAIAFVRALGFDQVDLLGFSLGGFVAQVIAQQEPQLVRKIILAGTGPAGGVGIGKVTFGTIRESIKAT
LTFRDPKELRFFTRTDSGKSAARQFVKRLKERKDNRDKSITVRAFRSQLKAIHAWGTQKPSDLTSIGHPVLIANGDDDTM
VPTSNSLDLADRLPDATLRIYPDAGHGGIFQHHAQFVDDALQFLES
>Mature_285_residues
PQRQAGDIGATYQDAPTKSINVGGTRFVYRRLGADAGVPVIFLHHLGAVLDNWDPRVVDGIAAKHPVVTFDNRGVGASEG
QTPDTVTTMADDAIAFVRALGFDQVDLLGFSLGGFVAQVIAQQEPQLVRKIILAGTGPAGGVGIGKVTFGTIRESIKATL
TFRDPKELRFFTRTDSGKSAARQFVKRLKERKDNRDKSITVRAFRSQLKAIHAWGTQKPSDLTSIGHPVLIANGDDDTMV
PTSNSLDLADRLPDATLRIYPDAGHGGIFQHHAQFVDDALQFLES

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.7.1.- [C]

Molecular weight: Translated: 30913; Mature: 30782

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRQAGDIGATYQDAPTKSINVGGTRFVYRRLGADAGVPVIFLHHLGAVLDNWDPRVVD
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHH
GIAAKHPVVTFDNRGVGASEGQTPDTVTTMADDAIAFVRALGFDQVDLLGFSLGGFVAQV
HHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IAQQEPQLVRKIILAGTGPAGGVGIGKVTFGTIRESIKATLTFRDPKELRFFTRTDSGKS
HHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEECCHHHCEEEEECCCCHH
AARQFVKRLKERKDNRDKSITVRAFRSQLKAIHAWGTQKPSDLTSIGHPVLIANGDDDTM
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCCCC
VPTSNSLDLADRLPDATLRIYPDAGHGGIFQHHAQFVDDALQFLES
CCCCCCCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQRQAGDIGATYQDAPTKSINVGGTRFVYRRLGADAGVPVIFLHHLGAVLDNWDPRVVD
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHH
GIAAKHPVVTFDNRGVGASEGQTPDTVTTMADDAIAFVRALGFDQVDLLGFSLGGFVAQV
HHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IAQQEPQLVRKIILAGTGPAGGVGIGKVTFGTIRESIKATLTFRDPKELRFFTRTDSGKS
HHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEECCHHHCEEEEECCCCHH
AARQFVKRLKERKDNRDKSITVRAFRSQLKAIHAWGTQKPSDLTSIGHPVLIANGDDDTM
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCCCC
VPTSNSLDLADRLPDATLRIYPDAGHGGIFQHHAQFVDDALQFLES
CCCCCCCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]

Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA